Transcript Information: R_Transcript_54178.p1


Annotated TAIR IDAT4G17895.1
Annotated Gene Nameubiquitin-specific protease 20
Annotated Gene Symbol(s)UBP20
Annotation TypeOrtholog
Chromosome Positionchr4:9939914-9942698 | Forward length=695
E-Value5.6E-112
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.5182738311854
Replicate 28.1917384199951
Replicate 310.209694913437
Condition 2: 8 Hour
Replicate 16.8325456481581
Replicate 29.4017344104985
Replicate 312.03231764609
Condition 3: 24 Hour
Replicate 112.52244030602
Replicate 211.16686719081
Replicate 312.767827734023


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54178.p1 GENE.R_Transcript_54178~~R_Transcript_54178.p1 ORF type:complete len:792 (+),score=176.70,UCH|PF00443.25|1e-54,UCH_1|PF13423.2|3.8e-25 R_Transcript_54178:565-2940(+)
ATGGCGGAAGAAGAAACACAGAAAACCCAAACCCTAGAGTACACTCCTGAATCAGACGAAATTCCAACAAAAGAACAAAACCCTTCATTTGAATCTATGCCAATTGAAAACCCTTGTCATGAATCTCCCAAATCCGATCAAACCCTAGATGGGTCTTCAAAAACTGAAGAAACCCCTGAAACCCTAAAAAATGGTGATAATGATGAAAATGCCAACGCCAAAGCCAATGTCAGTTTCGCTGAATCCCTCCTCTTGAAGAAATCATTCCAAGATGATGATGATGAGGTAGATGTTGACATTAACCTCGATAATTTAATGGAAGGAATTATTGGTAATGGTGATGATGAGGGTGGTAATTCAAATCCAAATGGGTTTTCAGAAAATCCTCAAATGGGTTTTAACTTTGATGATCATGATGACAACAAGGGTCTTGGTTGCTCAGATAACTGTGTTAATGGGGATGGAGAGAGAAAACCTTCCTTCTTTGATACGCATCCTTATGATATGCGTCGGAATTTCCGCAGTTGTAGGTGGGATCCCGATTGCAGATGCCCTGATTGTATGGAAAGAGAGCCTGATTTCTTGCCTTTTCCGTTTCCCCAGTGGAAGGAACCGGAGCCTTGTCCTGTGGGTGCTGGGCTAGCTAATATGGGCAATACATGTTTTTTGAATGCAATTATGCAGTGCTTTATTCATACTGTGCCTCTTGCTCAAGGCCTCCTTTCATTCAAAAACGAGTCATTTGATCATGGGAATGATGAGTTCTGTGTTCTTTGTGCTGTATGCGACCAGATTGAGTGCTCACTTGCTTACTCTGGCCGTGTGGTTTCTCCCGCCAACCTTGTGGATAATTTGGGTCAGATCTCTTCTTTTTTCCGGAGATATCAGCAAGAGGATGCCCATGAGTTTTTGCAGTGCTTATTGGACAAGCTTGACAGTAATTGGTTGAAGCATGAGGCAAATGGAAATGATTCATCAGCATCTGATGATAGCTTGGTGAAGCAGGTCTTTGGTGGTCGTCTTGTAAGCCAGCTTTATTGCAGCAACTGCAGTCATAAATCTGACACCTATGAGCCGCTAATTGACCTAAGTTTGGAGATTGAAGATGTAGATAACCTGGATAGTGCTTTGAGTTCTTTCACTAAGGTGGAACATCTTGAAGATATAGGAAAATTTACATGTGAAAGTTGCAAGGAGCAGGTCCCTATACAGAAGCAGCTTTTGCTAGATAAGACTCCTTCAGTAGCTGCTCTTCATTTGAAGAGGTTTAAGAGTGATGGACTTTATGTGGAGAAAATTGACAGAAAGGTTGCGTATCCCCTGGAGTTAGACTTAAAGCCCTACACCAGAGGAGTTGAGGACGAAAAAGAAGAGTTGACATATGAACTTTATGCAGTCGTTGTGCATATTGGGCTGTCGTCGACATCAGGGCATTACTACTGCTACGTCCGTTCTGCTCCAGACACATGGTGCCGGTTTGATGATTCAAGGGTCACGAGGGTTACAGAAGAATATGCGCTTTCTGAAGATGCATATATTCTATTTTATGCTAAGAAAGGCACTTCATGGTTCAGTAGTTTCTTTGAGAAAATGAAAGCATGCTCTGAACAAAAGATTTCAAGCACCTCTCCAAAGTCAGTTCTGGATGACATGGAACTGCCTTCTACTTCAAAATTTCTTGGAGCAAGTGTTCATGGTTGTCAGGCAGTGGGAAAGGGGAATACTGGTGAAGGAGCTGCTGCCCAGACTTCAGGTAGGTTAAGAAACGATGATGTTGAGACTATAAAAGGGGTTGATACTCGGGGTTCTGCCGAAGCAAGTAGATATTATTCATCATCTTTGATTGGGCCTTCTCATGAGGTGGCGAAGATAGATGAGGCTGGATTTAACGGTCTGTCTTCAGTCGGAGCAATTAGCAGTTGCATCCAGTCAGCTGCGAGGATTAGTGATGAAACCTGCTCCCCATCACATGCAGAAAACATAGAACGCAAGATCAGACACGACTTTCATGCCGACCCTTCAACTCCGCCTGGATGTTCAAGTCCGGGAATATACTCTGATGATGAAACTGCAGAAGACAAAACCTACCAAATCCCAATTGACCATCTGAAGATAGAAGATAAGGCATCATCAGTTAAGAAATCGATGGACAAGGTTAAACATGATTTGAAGAGGAAAGAAGCTGCAAAATACTGTAGGTCAATGCCAACTGGTAGGCGCCAAACTCTATTGGCTGCGATGATGGGTGGTTCGCGCAGTGACAATTATTTGCTCAAGAAGAGAAGAAGACCAGGTCTGTTTAAGCATAGTTGGCAGTCTCCCAAGAAACGAGTCAAAGTAAGTCCCAAACGTGTTTTGCGGCCATTGGTGGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54178.p1 GENE.R_Transcript_54178~~R_Transcript_54178.p1 ORF type:complete len:792 (+),score=176.70,UCH|PF00443.25|1e-54,UCH_1|PF13423.2|3.8e-25 R_Transcript_54178:565-2940(+)
MAEEETQKTQTLEYTPESDEIPTKEQNPSFESMPIENPCHESPKSDQTLDGSSKTEETPETLKNGDNDENANAKANVSFAESLLLKKSFQDDDDEVDVDINLDNLMEGIIGNGDDEGGNSNPNGFSENPQMGFNFDDHDDNKGLGCSDNCVNGDGERKPSFFDTHPYDMRRNFRSCRWDPDCRCPDCMEREPDFLPFPFPQWKEPEPCPVGAGLANMGNTCFLNAIMQCFIHTVPLAQGLLSFKNESFDHGNDEFCVLCAVCDQIECSLAYSGRVVSPANLVDNLGQISSFFRRYQQEDAHEFLQCLLDKLDSNWLKHEANGNDSSASDDSLVKQVFGGRLVSQLYCSNCSHKSDTYEPLIDLSLEIEDVDNLDSALSSFTKVEHLEDIGKFTCESCKEQVPIQKQLLLDKTPSVAALHLKRFKSDGLYVEKIDRKVAYPLELDLKPYTRGVEDEKEELTYELYAVVVHIGLSSTSGHYYCYVRSAPDTWCRFDDSRVTRVTEEYALSEDAYILFYAKKGTSWFSSFFEKMKACSEQKISSTSPKSVLDDMELPSTSKFLGASVHGCQAVGKGNTGEGAAAQTSGRLRNDDVETIKGVDTRGSAEASRYYSSSLIGPSHEVAKIDEAGFNGLSSVGAISSCIQSAARISDETCSPSHAENIERKIRHDFHADPSTPPGCSSPGIYSDDETAEDKTYQIPIDHLKIEDKASSVKKSMDKVKHDLKRKEAAKYCRSMPTGRRQTLLAAMMGGSRSDNYLLKKRRRPGLFKHSWQSPKKRVKVSPKRVLRPLVV*

Click here to download the sequence:
Link to NCBI Protein BLAST