Transcript Information: R_Transcript_54262.p1


Annotated TAIR IDAT1G10180.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: exocyst complex component 84B (TAIR:AT5G49830.1); Has 132 Blast hits to 132 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3338381-3341494 | Reverse length=769
E-Value8.1E-295
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.808934010806
Replicate 214.729962695155
Replicate 322.374022768335
Condition 2: 8 Hour
Replicate 116.576993840254
Replicate 216.900666507873
Replicate 323.662758547765
Condition 3: 24 Hour
Replicate 130.313797140457
Replicate 224.163901213449
Replicate 327.458606267412


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54262.p1 GENE.R_Transcript_54262~~R_Transcript_54262.p1 ORF type:complete len:774 (+),score=188.13,Exo84_C|PF16528.1|1.7e+03,Exo84_C|PF16528.1|1.3e-08 R_Transcript_54262:254-2575(+)
ATGGAGAGCAGTGAAGAAGATGACGATTTCCCCTACCATGAAGGGATTACCCCTCAAACTAAGATAAACTCTCTCTACCAGTCCAACACTGAAAAGGGGATCAGAAAACTATGTTCTGAGCTGTTGGATCTGAAGGATGCTGTGGAGAATCTATGTGGAAATACTAGAGCGAAGTACTTGGCTTTCTTAAGACTGTCTGAAGAGGTTGTTGAAATGGAGCATGAACTGGTTGAGCTGAGAAAGCACATATCTGCCCAAGGAATTCTGGTACAAGACCTATTAAGTGGTGTCTGTCATGAGTTAGAGGAGTGTATTAAAGCCGATGGACATGAGGATCTCCTTGAAGTTCGAAGTTGTGAGCTTGAGGACTTTTCTTCTGAAGAAACTAGTGATCCAAAAAAGAGATTCTTGGACAAGATTGACATCCTATTGGCTGAGCATAAAGTGCAGGAGGCAGTAGAAGCCTTCGATGTAGAGGAGAGAAGGTCACCAGAGCTGAGAAGTGCTGGAGATACTTCGGATGCGTTGTCCTATAAATCTGCTTTCCTGAAAAGGAAGGCAATCCTTGAAGAGCAGTTAGTTGCAGTTACTGATCAGCGATCCATTGGAGATAATGAGTTGAAGAAGGCATTGTGTGGTTTGCTGAAACTCGGCAAAGGACCCTTAGCACAGCAGATACTACTGAAAAGCTATACATCCCGCCTTCGGAAGAGACTCGAGGCTTTTGTTCCATCTTGTTCTCTTTACCCTGGAACATATTCAGCTACATTGTCCAAAATAATATTTTCCATTATCTCAGTAGCAGCGAAGGATTCTGCTTCAACTTTTGGCGATGATCCTATTTATACAAACAGAGTGGTGCAATGGGCGGAGCAAGAAATTGAATCTTTTGTGAGATTGGTCAAGGAGAATGGTCCACTATCTGAGACAATTACTGCATTGCATGCAGCTAGTGTTTGTGTTCAGGCTAGCTTCAGCAACTGTGTAATTTTAGAATTACAAGGCTTCAGGCTATCTAAGTTGCTTATGGTGCTATTACGGCCTTATATGGAAGAAGTTTTGGAGATGAATCTCAGACGAGCTAGACGAGTGCTTCTGAATTTGGCAGAAAATGAAGAAGAGGTTTTGTTGTCTCCTCGGTTTTTGGCACCATTGTCAATGTTTGCTTCCTCATCAGATAGTGTTCTCATTAGTAGTGGACTGAAGTTTACATCTATTGTCAAAGAAATAGTGGAACAGCTGACACCCCTGGCTATCCTGCAGTTTGGAGGAAATGTTTTGAGTAGAATTTCTCAGCTATTTGATAACTATGTGGATCTTTTGACAAAAGCTTTACCTAGCCCTTCAGAGGATGATGGCATTACAGAGTTGAAAGAGTCTTTGCCCTTCAAAGCAGAGACAGATTCTCAGCAGCTTACACTTTTGGGAGTTGCATACAATATTGTAGATGAGCTACTCCCAATGGCTGTATCAAGAATTTGGAATGTACACATGGAGACTCATGATCCTGGCAATGAATCACAAGATAACCTTGTGCCTGCAGGTGGTGATGCTGTTATTTTCAAAGACTGGAGGCGTCAGCTTCAGCATTCTCTAGACAAGCTAAGGGATCACTTCTGCAGGCAATATGTTTTGAACTTCATATACTCTCGAGAGGGGAAAGCACGGCTTGATGCCAGAATCTATGTTGATGGAGAAGGCGAGGATTTCGTTCAGGATTCTGACTCACTTCCTTCACTTCCATTCCAGGCTTTATTTGGAAGGCTGCAGCAATTGGCTACTGTGGCTGGGGATGTATTGCTAGGAAAGGAGAAGCTCCAGAAAGTCCTGCTGGCTAGGCTGACAGAAACAATCGTCATGTGGTTGTCAGATGAAGAAGAATTTTGGGGTGTTTTTGAAGATGAGTCAGTATTATTGAAGCCATCTGGCTTGCAACAGTTGATTCTTGATATGCATTTCACTGTTGAAATTGCACGATTTGCGGGCTATTCATCAAGGCATGTGCTACAGCTAGTATCGGGAATTATTACTCGTGCAGTGGAAACTTTTTCTGCGAAAGGCATTGATCCGCAGAGCACACTTCCTCAGGATGAATGGTTCTCAGAGAGTGCAAAAGCAGCCATAAACAAACTTCTGTTAGTCGCTTCTGGGTCTGAAGCATCTGAACCAGAAGAAGAACCAATCTTTGTACATCACCACCTGGCCTCGGATTCTGAGGACACAATATCTTGCTCTTCAACAGTAGACTCCTTCCATTCTTTTGTCTCAGCAGAAACGGGAGATATTGAAAGCCCTTCGCATTTTACTGATCCTGAGGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54262.p1 GENE.R_Transcript_54262~~R_Transcript_54262.p1 ORF type:complete len:774 (+),score=188.13,Exo84_C|PF16528.1|1.7e+03,Exo84_C|PF16528.1|1.3e-08 R_Transcript_54262:254-2575(+)
MESSEEDDDFPYHEGITPQTKINSLYQSNTEKGIRKLCSELLDLKDAVENLCGNTRAKYLAFLRLSEEVVEMEHELVELRKHISAQGILVQDLLSGVCHELEECIKADGHEDLLEVRSCELEDFSSEETSDPKKRFLDKIDILLAEHKVQEAVEAFDVEERRSPELRSAGDTSDALSYKSAFLKRKAILEEQLVAVTDQRSIGDNELKKALCGLLKLGKGPLAQQILLKSYTSRLRKRLEAFVPSCSLYPGTYSATLSKIIFSIISVAAKDSASTFGDDPIYTNRVVQWAEQEIESFVRLVKENGPLSETITALHAASVCVQASFSNCVILELQGFRLSKLLMVLLRPYMEEVLEMNLRRARRVLLNLAENEEEVLLSPRFLAPLSMFASSSDSVLISSGLKFTSIVKEIVEQLTPLAILQFGGNVLSRISQLFDNYVDLLTKALPSPSEDDGITELKESLPFKAETDSQQLTLLGVAYNIVDELLPMAVSRIWNVHMETHDPGNESQDNLVPAGGDAVIFKDWRRQLQHSLDKLRDHFCRQYVLNFIYSREGKARLDARIYVDGEGEDFVQDSDSLPSLPFQALFGRLQQLATVAGDVLLGKEKLQKVLLARLTETIVMWLSDEEEFWGVFEDESVLLKPSGLQQLILDMHFTVEIARFAGYSSRHVLQLVSGIITRAVETFSAKGIDPQSTLPQDEWFSESAKAAINKLLLVASGSEASEPEEEPIFVHHHLASDSEDTISCSSTVDSFHSFVSAETGDIESPSHFTDPEA*

Click here to download the sequence:
Link to NCBI Protein BLAST