Transcript Information: R_Transcript_54265.p1


Annotated TAIR IDAT4G17090.1
Annotated Gene Namechloroplast beta-amylase
Annotated Gene Symbol(s)CT-BMY, BAM3, BMY8
Annotation TypeOrtholog
Chromosome Positionchr4:9605266-9607250 | Reverse length=548
E-Value3.5E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28669572180186
Replicate 20.10992827443088
Replicate 30.35979168999192
Condition 2: 8 Hour
Replicate 10.38459473739129
Replicate 20.23414535959357
Replicate 30.57020766346765
Condition 3: 24 Hour
Replicate 10.12019794360055
Replicate 20
Replicate 30.11459531249685


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54265.p1 GENE.R_Transcript_54265~~R_Transcript_54265.p1 ORF type:3prime_partial len:191 (-),score=22.37,Glyco_hydro_14|PF01373.13|7.3e-38 R_Transcript_54265:1-570(-)
ATGACTTTAACTCTACGTTCTTCAAATTCTTTTATCAACCTCAGATATTTCAGAAGCCTCAAATCTTCTGAAGATTTCCCTGGTTTGATATGCTTTGCACAAATCAAGCCATCATTCCGTCTTCGTGCAGTCAATACAATCCAAGCAGCCCAATTTACAGTTGAGAAGACCTCAAGCATGGAAGTTAAAAGAAATGAAAACTGGGAGAAGCTCCATGAATTGGCAGTTCACCACAAAAATAACACAAGGGTGCCTGTGTTTGTCATGCTGCCATTGGACACCATATCAATTGGGGGGAATTTAAATAAACCACGGGCAATGAACGCCAGTCTAATGGCGCTAAAAAGTGCAGGCGTCGAAGGAGTCATGGTCGACGCTTGGTGGGGGTTGGTCGAGAAAGATGGACCCCTAAAGTATAACTGGGATGGCTATGCTGAGCTTGTGCAGATGGTGCAAAAGCATGGTTTAAAACTCCAAGTCGTTATGTCTTTCCATCAATGTGGAGGGAATGTAGGAGATTCGGAATCAAGAGTGAGAAGGAGAAGAAGAGCCGGAATTGGAGCAACGAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54265.p1 GENE.R_Transcript_54265~~R_Transcript_54265.p1 ORF type:3prime_partial len:191 (-),score=22.37,Glyco_hydro_14|PF01373.13|7.3e-38 R_Transcript_54265:1-570(-)
MTLTLRSSNSFINLRYFRSLKSSEDFPGLICFAQIKPSFRLRAVNTIQAAQFTVEKTSSMEVKRNENWEKLHELAVHHKNNTRVPVFVMLPLDTISIGGNLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKDGPLKYNWDGYAELVQMVQKHGLKLQVVMSFHQCGGNVGDSESRVRRRRRAGIGATK

Click here to download the sequence:
Link to NCBI Protein BLAST