Transcript Information: R_Transcript_54273.p1


Annotated TAIR IDAT3G29230.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:11188803-11190605 | Forward length=600
E-Value2.2E-153
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1175282217175
Replicate 20.91055384458435
Replicate 31.2271466569367
Condition 2: 8 Hour
Replicate 11.311742765031
Replicate 21.311990516192
Replicate 31.9448154236129
Condition 3: 24 Hour
Replicate 11.5227117038783
Replicate 21.1815317262809
Replicate 32.0100953283885


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54273.p1 GENE.R_Transcript_54273~~R_Transcript_54273.p1 ORF type:complete len:392 (+),score=78.11,PPR_2|PF13041.2|3.9e-09,PPR_2|PF13041.2|4.1e-06,PPR_2|PF13041.2|1.5e-09,PPR_2|PF13041.2|0.0028,PPR_2|PF13041.2|1.4e-10,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|3.3e+02,PPR_2|PF13041.2|3.8e+03,PPR|PF01535.16|9.6e+02,PPR|PF01535.16|7.5e-08,PPR|PF01535.16|1.1e-07,PPR|PF01535.16|8.6e-05,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|0.00029,PPR|PF01535.16|1e-06,PPR|PF01535.16|5.4,PPR|PF01535.16|0.001,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|2.6e+02,PPR_1|PF12854.3|2.1e+03,PPR_1|PF12854.3|9.1e-08,PPR_1|PF12854.3|1.5e-06,PPR_1|PF12854.3|0.0027,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|0.0024,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|0.00048,PPR_1|PF12854.3|2.4e+02,PPR_3|PF13812.2|2.1e-05,PPR_3|PF13812.2|0.0099,PPR_3|PF13812.2|2.2e-05,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|22,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|5.2e+02,PPR_3|PF13812.2|3.5e+03 R_Transcript_54273:176-1177(+)
ATGGCTAGAATGTTGTTTGATAAGATGCCTGTAAAGAATTTGGTATCATGGACTATAATAATTTCTGCATATGCTGAGAAGGGAGTTGCAAAGGAGGCTACTGCCTTGTACAATGAGATGGAGAATACAGGACTGAAACCTGATGATGGGACAATTATCAGTATCCTAGCTGCTTGTGCAGAGTCTGGCTTGCTAGGACTAGGAAAGCGAGTTCATGGATCAATGCAAGCAACTAGATTTCGAAGTAGTGTATCAGTGACTAATGCATTAATTGATATGTATACCAAATGTGGTAGCGTCGGAAAGGCATTGGAGATATTTGAAGGGATGGCAAAAAGAGATTTGGTTTCCTGGAATGCCATTATCCAAGGTTTAGCAATGCACGGACATGGAAAAACCGCCCTCAAGCTTTTCTCTAGAATGGAACAAGAAGGATTCAAACCTGATAAAGTCACTTTCATCGGGATCTTATGTGCTTGTACTCACATGGGTTTCGTTGATAGGGGTCTGGATTACTTTTATGCAATGGAAAGGGAATATGGACTTGTCCCTCAAATCGAGCATTATGGTTGCTTGATTGACCTTTTGGGTCGTGGAGGACGTTTAGAGGAAGCCATGGAGGTCGTTCAAAGCATGCATGTGGAACCAAATGCCATCATTTGGGGTACCCTGTTAGGAGCATGCCGGATGCATAATGCTGTAGAACTTGCTGGGGAAGTTCTGAAGCATTTGATTAAACTAGAACCAACTGATGCTGGTAATTACTCAATGTTGTCCAATATTTATGCTGCTGCAGGTGATTGGACTAATGTTGCCAATATGAGACTCTCTATGAAGAGCACTGGAGTCCAAAAACCATCTGGCGCTAGTTCTGTTGAGTTGGATGGTGAGGTTCATGAATTTACTGTATTTGATAATTCACACCCAAAATCAGAGAGTATATACAATATGATCAGCATACTACAACCACAGCGTAAGAAAGCTGGTTATGTTCCCTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54273.p1 GENE.R_Transcript_54273~~R_Transcript_54273.p1 ORF type:complete len:392 (+),score=78.11,PPR_2|PF13041.2|3.9e-09,PPR_2|PF13041.2|4.1e-06,PPR_2|PF13041.2|1.5e-09,PPR_2|PF13041.2|0.0028,PPR_2|PF13041.2|1.4e-10,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|3.3e+02,PPR_2|PF13041.2|3.8e+03,PPR|PF01535.16|9.6e+02,PPR|PF01535.16|7.5e-08,PPR|PF01535.16|1.1e-07,PPR|PF01535.16|8.6e-05,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|0.00029,PPR|PF01535.16|1e-06,PPR|PF01535.16|5.4,PPR|PF01535.16|0.001,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|2.6e+02,PPR_1|PF12854.3|2.1e+03,PPR_1|PF12854.3|9.1e-08,PPR_1|PF12854.3|1.5e-06,PPR_1|PF12854.3|0.0027,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|0.0024,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|0.00048,PPR_1|PF12854.3|2.4e+02,PPR_3|PF13812.2|2.1e-05,PPR_3|PF13812.2|0.0099,PPR_3|PF13812.2|2.2e-05,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|22,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|5.2e+02,PPR_3|PF13812.2|3.5e+03 R_Transcript_54273:176-1177(+)
MARMLFDKMPVKNLVSWTIIISAYAEKGVAKEATALYNEMENTGLKPDDGTIISILAACAESGLLGLGKRVHGSMQATRFRSSVSVTNALIDMYTKCGSVGKALEIFEGMAKRDLVSWNAIIQGLAMHGHGKTALKLFSRMEQEGFKPDKVTFIGILCACTHMGFVDRGLDYFYAMEREYGLVPQIEHYGCLIDLLGRGGRLEEAMEVVQSMHVEPNAIIWGTLLGACRMHNAVELAGEVLKHLIKLEPTDAGNYSMLSNIYAAAGDWTNVANMRLSMKSTGVQKPSGASSVELDGEVHEFTVFDNSHPKSESIYNMISILQPQRKKAGYVPF*

Click here to download the sequence:
Link to NCBI Protein BLAST