Transcript Information: R_Transcript_5431.p1


Annotated TAIR IDAT5G49700.1
Annotated Gene NamePredicted AT-hook DNA-binding family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20192599-20193429 | Forward length=276
E-Value1.3E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.196747409226
Replicate 210.381504094725
Replicate 311.326109144764
Condition 2: 8 Hour
Replicate 125.506109320047
Replicate 231.61580238101
Replicate 333.883006491389
Condition 3: 24 Hour
Replicate 123.659295781884
Replicate 217.276619464285
Replicate 323.5900817181


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5431.p1 GENE.R_Transcript_5431~~R_Transcript_5431.p1 ORF type:complete len:360 (+),score=49.37,DUF296|PF03479.11|2.6e-21,DUF296|PF03479.11|1.6e+04 R_Transcript_5431:187-1266(+)
ATGAAAGGAGAGTATACAGAAAATCAAGATCACCACCATAACCACAATGCTCATCACTCCATCTTCTCCAAATTCCAGCCCCCACATCTTCACTCTCAACCCCAACCCCCTAAATTCCAACCCAACCTTAACCCTCATCACTACAACCCTTTTCCCTTAACAACCACCACAACCCTTAAAGACTCCGAAGAAGCTGATAGCGCCGCCACAACAACCACCCCAACAGCACAACTCCAACAGCCACCTTCTAAGAAATCCAAAACCAGCAACACAGCAACAACCGCAACAAGCGAAGATGGAGGTGGGACAATCGAAGTTGCACGAAGGCCAAGAGGCAGACCGCCCGGTTCCAAGAACAAACCCAAACCGCCCATTGTCATAACCCGGGAACCCGAACCCGCTATGGCCCCTTACATACTCGAAGTTCCAGGCGGGTCGGATATCGTGGACTCACTCACGCGCTTCACGCGCCGTCGTGGAATTGGGCTGTGTGTGCTGACGGCTTCAGGGGCGGTGGCTAATGTGTCTCTTAAACAGCCGTCGACTTCTGCCCCTGCTGGAACGGTGACGTTTCATGGCCGTTTTGATATCTTGTCTTTATCTGCTGTTCTACTTCTCCCAACGGTGCCGCTTAGTAATAGTAGTGGGGGAAGTGGAAATAGTGGGAATAACAATAATGGGGTTGGAAATAGTAATAATGCGGGCTATGGGTTCACGATATCGTTGGCGGGGCCACAAGGGCAAATTGTAGGCGGGAAGGTGGTGGGCCCCTTGCTAGCTGCTGGAACTGTTTACATCATTGCGGCGTCGTTTTGTAGCCCCAGTTATCATCGCCTCCCACTTGAGCAAGATCATCACCAACAACAGCCACAACACTTCAATAATCAAAACCAAAATCCTTCATCAGTCTCTGGTGGTGGTGGTGAAAGGCAGTCAAGTTCGCCGGTTTCTGGCGGCGGTGGCGGCGGTGAAAGTAGCGGTGGAGGAGTTGGTGGTGGTGTAAGTGGGCCCATGGGAATGTATAGTTGTCATATGGGGTCTGATGTTATTTGGGCACCCACTGCCAGGCCACCCTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5431.p1 GENE.R_Transcript_5431~~R_Transcript_5431.p1 ORF type:complete len:360 (+),score=49.37,DUF296|PF03479.11|2.6e-21,DUF296|PF03479.11|1.6e+04 R_Transcript_5431:187-1266(+)
MKGEYTENQDHHHNHNAHHSIFSKFQPPHLHSQPQPPKFQPNLNPHHYNPFPLTTTTTLKDSEEADSAATTTTPTAQLQQPPSKKSKTSNTATTATSEDGGGTIEVARRPRGRPPGSKNKPKPPIVITREPEPAMAPYILEVPGGSDIVDSLTRFTRRRGIGLCVLTASGAVANVSLKQPSTSAPAGTVTFHGRFDILSLSAVLLLPTVPLSNSSGGSGNSGNNNNGVGNSNNAGYGFTISLAGPQGQIVGGKVVGPLLAAGTVYIIAASFCSPSYHRLPLEQDHHQQQPQHFNNQNQNPSSVSGGGGERQSSSPVSGGGGGGESSGGGVGGGVSGPMGMYSCHMGSDVIWAPTARPPF*

Click here to download the sequence:
Link to NCBI Protein BLAST