Transcript Information: R_Transcript_54369.p1


Annotated TAIR IDAT5G48250.1
Annotated Gene NameB-box type zinc finger protein with CCT domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19561719-19563113 | Reverse length=373
E-Value1.2E-136
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.7452761330962
Replicate 23.9722730517321
Replicate 37.879467477792
Condition 2: 8 Hour
Replicate 112.152689728117
Replicate 213.185777989888
Replicate 318.998983106351
Condition 3: 24 Hour
Replicate 110.435366921684
Replicate 28.345233093732
Replicate 39.9489566758624


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54369.p1 GENE.R_Transcript_54369~~R_Transcript_54369.p1 ORF type:complete len:407 (+),score=85.00,CCT|PF06203.10|2.4e-16,zf-B_box|PF00643.20|0.00039,zf-B_box|PF00643.20|1.8e-05,zf-B_box|PF00643.20|1.4e+04 R_Transcript_54369:432-1652(+)
ATGGGATATATGTGTGATTTTTGTGGTGAGCGAAGGTCAATGGTATATTGTCGCTCTGATGCTGCTTGTTTGTGCTTGTCATGTGATCGGAATATACACTCTGCCAATGCTCTTTCAAAGCGCCATTCTCGGACCCTTGTTTGTGAAAGATGTAACAGCCAACCTGCCTCTGTTAGATGTATTGATGAAGGAATTTCCCTTTGTCATAACTGTAACATGTTAGGACATGATGAGTCGATGGCTTCATTTCATAAGAGGCAATCTATAAATTATTATTCTGGCTGCCCATCTGCAGCAGAGCTCTCTACAATCTGGTCATTCTCATTGGATATTCTCCCTTCACTAGATGATTCGACTTGTCACGAAGGAATGGGTTTGCTGAGTATTGCAGAGAGCGGTAGAATTAACTGCTTGAATCCTGTTGATAAACAGAGTGGATCAGATGCAAAGGTTGTTTCTGCAAATGATATGCAGAATGATAAATCATGCGCTTGGAGTGAGTCTCTGACCATCCCTAAACTTGGTTCATGTGAGTTTCATGACCGACTTGGATCCTCAGGTTCCCTTGAGTATCTCTATCCCGACACCAGAATTCCAGGAATTTGTGAAGATGACCCATGTGGAGACTTGGACATGGATGAAGTTGACATTAATCTTGAGAACTATGATGAGCTCTTTGGTTATGCTCTTACAAATTCTGAGCAACTACTTGAGAATGGTGGAATTGATAGCTTATTTGTGAGGCGAGATAAGTCTATTGCTGATTCCCGTTGCCATGCTGGAGAGGGGACATCTGCTGGAATCACTAATCCTGTGCAGCCAACATGCAGCAATCCAGCCTCTGCGGACTCAGTCATGAGCATCAAAACTGAACCAAACCTTGGTTTGGCCACAAGACAAGCCCATTCTGGTGTCTCTTTTTCTGGTGTTACTGGAGAGAGCAGTGGTGGAGATTATCAAGACTGTGGGGCTTCTTCAATGCTTTTACTTGGAGAGCCACCATGGTGCCCTCCATGTTCTGAGAGTTCCTTCCAATCGGCTAATCGAACTGAAGCAGTTAAAAGATACAAGGAAAAGAAGAAGACCCGAAAATTTGAGAAAAGAGTGAGATACGAATCCCGGAAAGCAAGGGCTGATATCAGGAAGCGTGTGAAGGGCCGATTTGTCAAGGCCGGTGATGCTTATGATTATGATCCCATGAGTCATACTAGGAGCATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54369.p1 GENE.R_Transcript_54369~~R_Transcript_54369.p1 ORF type:complete len:407 (+),score=85.00,CCT|PF06203.10|2.4e-16,zf-B_box|PF00643.20|0.00039,zf-B_box|PF00643.20|1.8e-05,zf-B_box|PF00643.20|1.4e+04 R_Transcript_54369:432-1652(+)
MGYMCDFCGERRSMVYCRSDAACLCLSCDRNIHSANALSKRHSRTLVCERCNSQPASVRCIDEGISLCHNCNMLGHDESMASFHKRQSINYYSGCPSAAELSTIWSFSLDILPSLDDSTCHEGMGLLSIAESGRINCLNPVDKQSGSDAKVVSANDMQNDKSCAWSESLTIPKLGSCEFHDRLGSSGSLEYLYPDTRIPGICEDDPCGDLDMDEVDINLENYDELFGYALTNSEQLLENGGIDSLFVRRDKSIADSRCHAGEGTSAGITNPVQPTCSNPASADSVMSIKTEPNLGLATRQAHSGVSFSGVTGESSGGDYQDCGASSMLLLGEPPWCPPCSESSFQSANRTEAVKRYKEKKKTRKFEKRVRYESRKARADIRKRVKGRFVKAGDAYDYDPMSHTRSI*

Click here to download the sequence:
Link to NCBI Protein BLAST