Transcript Information: R_Transcript_54377.p1


Annotated TAIR IDAT1G22310.2
Annotated Gene Namemethyl-CPG-binding domain 8
Annotated Gene Symbol(s)MBD8, ATMBD8
Annotation TypeOrtholog
Chromosome Positionchr1:7881714-7883644 | Reverse length=524
E-Value1.8E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.3364801627392
Replicate 24.9300705397385
Replicate 35.3311951449609
Condition 2: 8 Hour
Replicate 17.0853435171932
Replicate 29.0802475984925
Replicate 310.003442869523
Condition 3: 24 Hour
Replicate 19.1799519232325
Replicate 26.717105780901
Replicate 38.0718468942011


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54377.p1 GENE.R_Transcript_54377~~R_Transcript_54377.p1 ORF type:complete len:1448 (+),score=341.99 R_Transcript_54377:138-4481(+)
ATGGCATCGATAACAGTAGACCCGGCCCCACCACCACCGGAGCGGCTATCATTAGAATCAATCCCGACCGTCGATCTCCGACTATTATCCCAATCAGAGCTAACAGCCCTATCTCTCTGTTCCTCTCACGCCTTCGATCTCCGTCGCTGCGACGACGTTGTAATCCCTAAAATCGACCGGTCCGTATTCAACGAATCAGCCGGTAGTCGCAAACAAACCTACTCTCGTCTCCGTTTAGCTCCTCGAAAACCGGACCTCTCCACTCCCATTCTGAAACCTCGTACCCCCGCTCCAAACGAACCTCTCGACTCCGAGCGTGCCGAGAACTCTCGAATCATCGCCTTGTTTAAGCACCTCTTCGATTCGCCGGGCTCCGACTCTCTTGTCCCTGTCAATGTGGAGTATAGCGACGCTCTTCCTGTGGGACCTTCTAATGTCACCGTTCCTATTCCCGTCATTGGAGGTGGAGGAGAGAGAAAGAAGAAACGCGGTCGGAAGCCGAAGAGCGAGACCATGGCCTTGGCCTTGGCATTGGTCGAGAAACGAGAAATGTTGGTTAAGGATAAGGAGAAGAACAACAAGGTTGATGAGGAGGAGGAGAAGAGGAAAAAAGAGGAGAGGGAGAAGGAGTTGGTGAACAAGAATGGAGTGGTCGTGGACCTTGTGGAGCTGGCTAAGTTAGATGACCCTTACGGACCAGAGTTGAAGCGTAGGACGGAAGGGAGGGAGACGCCCGAGGAGTTGCTAGGGTTTATGAGCGATTTGAAAGGCCAGTGGGGAAGTCGTAGAAAGAAGTGTAAGATTGTCGATGCTAATGAGTTTGGTGATGCTTTGCCTAATGGTTGGAAGGTCTTGATTGGGATGAAGAAGAAGCAAGGCCTTGCTTGGCTCTTTTGCCGCCGTTATGTAAGTCCTTCTGGACGGTACTTTGTGTCCTGCAAGGAAGTTTCTTCTTATTTGCTCTCCCTGACTAGCCCTCGAGATGTAAAGCAGCATGACACTGTGCAATGCACAGAGGACTCCGTGGTCGACAACAAATGGAGTTCTGGAAATGTTGGGGATGTCAGAGAAAAGACTGATGGCCCCCGGCCCCCATCACATGATGCTTCACAATCTATTGATGCTGAAAATCAGCAAAAGCAAATTTGTACTGCCATTACCATATATCAGGAAAAGCTTGTTCAGCCAGGGGAGGTTGAAGTGGCATCTGCGTTGAAGTGCCACAAATGTTCAACTCCATTTAATGAGAAAGATGAGTTGCTGAACCACCTTGTATCATGTCACAAGAGAAAGCGTCGGAAAGCTGGCGCACCAATTGAAGATGATATTATGATGAAAGATGGCAAGTATGAGTGTCAATTTTGCAACAAAATGTTCCATGAAAGAAATAGTTATTTTGGGCATGTTGGGATACATGTGAAAAATTATGTGAAGAGCATTGGTGGAGCACACCTTGTGACAGCAAAGCAAAATACATATGACCCTGTCTTCACAGCTGGAGGTCCTGTGACTCTCTCAGAAATGGTGGGATCAGTTGAAGTCAACATTGATTCTGTTGCTGGAACTCCTGATATTCTGGCCAGTGGTGAGCGAAATATAAGTTCTGTTAACAGCAAAGAAAAGGTTGTTGCTTCTGATGCAGAAACTCATGCAGAAAATTGTAATAATGACAGAGGTATTATGCCTCTCCAAGCTGAGCTGAACATAGAAGCTCCACAAAATGATAAAACTTCCGCTGATGACCAAGGTAGTATGTCTGTCCATGCCAAGCTGAACATGGAAGTTGCTCAAAGTGATAAAGCTTCCACTGATGAACCTTCTGACAAGCAGGATGGGTTTGTCCATACAGCTGTTGATGAAGTTAGGCAGGCTGACGAGCCTGCTGATGTTTCTTCTGTGAAGAATGTTTTTTTTTTGGATTCGTATAAGATGTTGTCTACAAATGAGAATAGTAATTTATGCAGGGTTTCTGGTCATATAACCACTAGTGAATGTCATGGAATCAGTCCCCCGATGATGGTTGGAAATGTTGATGAGTGTTTATTTGTGGATAGCGACCAAGTAGATGTCCGAAAACATGGAAATGTTAGTCCTGGGAGTGACATGGAGTATGAGGGTGTTGCTACTGAAAATGGTTTGCCTTCTGACAACGGGGAAAAGTCACTTAGCAAGCAAAATTTTGAAGATAGATCTCGAGGGATTAACACAGTGGACCGTAGTTGTTATGATGAACTGGTCAAAGTTGGGGATAATGATGAGCTGATGGTTGGAACTGGCAGTGTTCATCTTGATCACGACAATGACACTAAAGATGTTGACCGGCATACTGGAAGATTGAAAGAATGTTCAGCTGTTTCTCATGAGGTGGAGGAACCTTGTGGTATCACAGATAATGAGATTGATATGGAGTCATTAGCTGATTCCAAGGTCGAAAGAGCTTCTGAGACCAGTTCTTCTGCTCCGTCTGGGGATCGAAATACAATTGCGACTCAAAGCTATGTGGGGGAGGTTTTTACTGGCATGATAAATGAGACAGAGGTGGATCTCTCCAGCTTGGGAAATGCTGAAATGACGGTTGATTCTGATGACCGCATTGCTGAGGAAAGACGCTCCGAATGTAGTGCTCCTGTTTCCAAGGATAATGATCCTAGTTGCACTATAAATGATTCAGTAAAGGTGCCTGCGGTGACGATGCTGGAACCTCATGGGTCAGGAGGTTTTCAGGCTCAGCAAACATGTTGCCTTGACAATAGTGCTGGAGAGGTCTCAAATAGAGTGAGTGAAGAGCCTAAAAGTGACCAAGTCAAAGATTCATGCAATCTGTTTTTCACTTCTAGAAGCTCTGATGCTCCTATGCATACAAAGGTTATGGCTGAGCAAGGAGAGATCTCTGCAGTATGTTCACCGATTCATTCACAGACTGGTAAAGCACGTAGTGATACGTCCAGTATATTTGGGGCCTACAATAGCTTTGTTGAGGATAAGCAGGATAGAAATGCTAAGAGTATTCTATCTGGCCTTTCCATTGATGAGCAAATGCATGAAGTTCGTATTAAAAATGTAACCACGGTTTCTGCTCCTACGACTAGAACACAGCTGCCTGAACTTCATAAGGTGGAGAAGTCGCAGAGTGATAAGCTGATCCTTGATTTTGGTAGCATGGCAGATATGAATGCAAGGTTTTTGAATACTGTTCAGCATGAGACAGTTCCTGAAGGGTCTTCCCCCTTTTCTTTATGGGGGGGTGATCAAACATGTGTTGAAGACAACCAGGCCAGAGTATATGGTGATGGTGGGGGGGTTGCTCAGCAAGAGAGGGCTTCTGATAACACTTCACTTAGTTTTATAGGCCTTCAGCAACCATGTGATGCCAGATATAACTTGAACAAGGTCTGCATGAATGAGCAAAGGTATGGGGTTCAACATAACGAAACTGGAATTTACAGCAGAAATAGTGAAGCTGGGAGAGATGGGATTTCCCATGGAAATACTATTAATCTAAGTGGTCTTCAGCAACAATGTGATGCTCGATATAACTTGAATAAACCCTGTCAGCAAAGTTTTGGTCTCCAACATAATGAAACTGGAGCTTATAGTGGAAGTGATGAGGCCCAGCGAGAGAGGGTAGCTTGTGGCAATTCTCTTAGTCTAGCTAGTGTTGGGCAAACATGTGACACTGGCTACAGTTTGAACAAGGCTTGTATTCAGCAGACATGCGACAATGGGTATAGTGTGAACAAGGGATATATTGGGACTATCCAAGGTTTGTCTAAACTAGATGGAGTTCAACAATATCGGGATAGGGACTTAGTAGATGGTTTTGGAAACAGTGGTTCAAGACCCAATCAGAGTGTTGCGACGGATTTTATGTGGAGACCAACTGAAGGAAACCTTTTGCCTGGCACTTTAGTAGACTCTTCATCCTCCCAAGGCCAGTCTTCTGGCTCCTTTCAGGCATTTGATTTCCTTTCAGATAAGGGTGGGAATGGCCTTTTCACCAGTAATGAGAAGTTTGATAGTATGTCTAGCTTTGAGGGGCTGAGATCTACAAGTGTAGAACCTATGGAGTTCAGTTTCCTGACTACCCAAGATTCAAATACCCAATTGGAGGATCCAAAGGTCTTGTCATACAACTCTGAGATGGATCAAGGTTTCGGTTCTTCTGTTTGGCATCAAAAGGGAGCATCAATGCCAAATATGATGGCTGGGCATGTTGTTAGCACTTTATGTGTGTGGTGCGGAAACGAGTTCCATCAAGATTCACTTGGGTGTGAAATGCAATCTGGTTCGATTGGCTATCTATGTCCAACATGCAAGGCTAGAATGGCGGGGCAGTTTCTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54377.p1 GENE.R_Transcript_54377~~R_Transcript_54377.p1 ORF type:complete len:1448 (+),score=341.99 R_Transcript_54377:138-4481(+)
MASITVDPAPPPPERLSLESIPTVDLRLLSQSELTALSLCSSHAFDLRRCDDVVIPKIDRSVFNESAGSRKQTYSRLRLAPRKPDLSTPILKPRTPAPNEPLDSERAENSRIIALFKHLFDSPGSDSLVPVNVEYSDALPVGPSNVTVPIPVIGGGGERKKKRGRKPKSETMALALALVEKREMLVKDKEKNNKVDEEEEKRKKEEREKELVNKNGVVVDLVELAKLDDPYGPELKRRTEGRETPEELLGFMSDLKGQWGSRRKKCKIVDANEFGDALPNGWKVLIGMKKKQGLAWLFCRRYVSPSGRYFVSCKEVSSYLLSLTSPRDVKQHDTVQCTEDSVVDNKWSSGNVGDVREKTDGPRPPSHDASQSIDAENQQKQICTAITIYQEKLVQPGEVEVASALKCHKCSTPFNEKDELLNHLVSCHKRKRRKAGAPIEDDIMMKDGKYECQFCNKMFHERNSYFGHVGIHVKNYVKSIGGAHLVTAKQNTYDPVFTAGGPVTLSEMVGSVEVNIDSVAGTPDILASGERNISSVNSKEKVVASDAETHAENCNNDRGIMPLQAELNIEAPQNDKTSADDQGSMSVHAKLNMEVAQSDKASTDEPSDKQDGFVHTAVDEVRQADEPADVSSVKNVFFLDSYKMLSTNENSNLCRVSGHITTSECHGISPPMMVGNVDECLFVDSDQVDVRKHGNVSPGSDMEYEGVATENGLPSDNGEKSLSKQNFEDRSRGINTVDRSCYDELVKVGDNDELMVGTGSVHLDHDNDTKDVDRHTGRLKECSAVSHEVEEPCGITDNEIDMESLADSKVERASETSSSAPSGDRNTIATQSYVGEVFTGMINETEVDLSSLGNAEMTVDSDDRIAEERRSECSAPVSKDNDPSCTINDSVKVPAVTMLEPHGSGGFQAQQTCCLDNSAGEVSNRVSEEPKSDQVKDSCNLFFTSRSSDAPMHTKVMAEQGEISAVCSPIHSQTGKARSDTSSIFGAYNSFVEDKQDRNAKSILSGLSIDEQMHEVRIKNVTTVSAPTTRTQLPELHKVEKSQSDKLILDFGSMADMNARFLNTVQHETVPEGSSPFSLWGGDQTCVEDNQARVYGDGGGVAQQERASDNTSLSFIGLQQPCDARYNLNKVCMNEQRYGVQHNETGIYSRNSEAGRDGISHGNTINLSGLQQQCDARYNLNKPCQQSFGLQHNETGAYSGSDEAQRERVACGNSLSLASVGQTCDTGYSLNKACIQQTCDNGYSVNKGYIGTIQGLSKLDGVQQYRDRDLVDGFGNSGSRPNQSVATDFMWRPTEGNLLPGTLVDSSSSQGQSSGSFQAFDFLSDKGGNGLFTSNEKFDSMSSFEGLRSTSVEPMEFSFLTTQDSNTQLEDPKVLSYNSEMDQGFGSSVWHQKGASMPNMMAGHVVSTLCVWCGNEFHQDSLGCEMQSGSIGYLCPTCKARMAGQFL*

Click here to download the sequence:
Link to NCBI Protein BLAST