Transcript Information: R_Transcript_54400.p1


Annotated TAIR IDAT3G19490.1
Annotated Gene Namesodium:hydrogen antiporter 1
Annotated Gene Symbol(s)ATNHD1, NHD1
Annotation TypeOrtholog
Chromosome Positionchr3:6754875-6758127 | Reverse length=576
E-Value3E-175
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.5703859044373
Replicate 22.5172676248423
Replicate 32.9959765793333
Condition 2: 8 Hour
Replicate 13.0690729906629
Replicate 22.6199398342533
Replicate 33.4127006343507
Condition 3: 24 Hour
Replicate 14.4414286462316
Replicate 24.026436909179
Replicate 35.1289989184555


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54400.p1 GENE.R_Transcript_54400~~R_Transcript_54400.p1 ORF type:complete len:367 (+),score=84.38,CitMHS|PF03600.12|1.9e-16 R_Transcript_54400:171-1271(+)
ATGGCATCTTCTCTCTCCTCCCCAAGCTATCACCACTTGTCGACATCACTTCCCAAGTACCGTCCGGCGATTCTCCGGCGAGCCTCGCCGGATACTGTCGAGTTTCCGGGGAGCTTGAATTCGACTCTATGGAGAGGTAAATGGAGAAGATATTTACACAGAGAGGGTATAATTGTCAGAGCTGAAGATAAGGCTCGTGGTGCATCTTCTTCTCCGCCTCAACTTCAGGAGCTGAATCCGACATCAGGAGAATGTGATCCTCTATGTTCAGTTGATGAAACTAGCTCTGAAGATCTGGAAGCAACTTATCAGCCAAAGACCGACTTGTTAAAAGCACTTGCCATTTTTGCAGCTGCATTGACAGGAACAGCAGCCATTAATCATTCATGGGTTGCTGCTAATCAGGATCTTGCTATGGCATTGCTATTCGGAATAGGATATGCAGGGATTATCTCTGAAGAATCTCTAGCTTTCAACAAAAGTGGAGTAGGATTACTCATGGCAGTAAGCTTGTGGGTCATAAGAAGTATAGGGGCTCCATCAACTGAGGTTGCTGTTTCAGAGCTACAACATGCCACTGGTGAAGTCAGTGAAATTGTGTTCTTTTTGCTAGGTGCTATGACAATTGTTGAAATAGTTGATGCTCATCAAGGATTTAAGCTTGTAACTGAGAACATAACTACACGTAAGCCACGCACTCTGCTATGGGTGGTTGGCTTTGTGACATTTTTCTTGAGTGCAATTCTTGACAACTTGACATCTACCATAGTCATGGTTTCTTTGTTGAGGAAAATGGTTCCCCCATCTGAATACCGCAAGCTGCTAGGTGCTGTTGTTGTCATAGCTGCTAATGCTGGCGGTGCTTGGACTCCAATTGGAGATGTCACTACAACCATGCTCTGGATACATGGTCAGCTATCCACATTGCCAACGATGAAGGACTTGATTATCCCTTCTGCAGTTTCTTTGGCTGTTCCTTTGGCCATTATGTCTCTTACAAGTGAAGTAAATGGGAAGGGACCAGAATCTTCCAGTGTTTTGGCTTCTGAACAGATGGCACCCGAGGACAGCTTGTCTTTGCAATTGGTGTTGGTGCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54400.p1 GENE.R_Transcript_54400~~R_Transcript_54400.p1 ORF type:complete len:367 (+),score=84.38,CitMHS|PF03600.12|1.9e-16 R_Transcript_54400:171-1271(+)
MASSLSSPSYHHLSTSLPKYRPAILRRASPDTVEFPGSLNSTLWRGKWRRYLHREGIIVRAEDKARGASSSPPQLQELNPTSGECDPLCSVDETSSEDLEATYQPKTDLLKALAIFAAALTGTAAINHSWVAANQDLAMALLFGIGYAGIISEESLAFNKSGVGLLMAVSLWVIRSIGAPSTEVAVSELQHATGEVSEIVFFLLGAMTIVEIVDAHQGFKLVTENITTRKPRTLLWVVGFVTFFLSAILDNLTSTIVMVSLLRKMVPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQLSTLPTMKDLIIPSAVSLAVPLAIMSLTSEVNGKGPESSSVLASEQMAPEDSLSLQLVLVL*

Click here to download the sequence:
Link to NCBI Protein BLAST