Transcript Information: R_Transcript_54416.p1


Annotated TAIR IDAT4G08540.1
Annotated Gene NameDNA-directed RNA polymerase II protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:5433760-5436326 | Forward length=473
E-Value8.7E-204
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.722806820056
Replicate 28.5071217203966
Replicate 39.5773859777017
Condition 2: 8 Hour
Replicate 110.079310786474
Replicate 211.758739588899
Replicate 314.200505722415
Condition 3: 24 Hour
Replicate 111.726293777944
Replicate 28.2707220839665
Replicate 310.519306347367


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54416.p1 GENE.R_Transcript_54416~~R_Transcript_54416.p1 ORF type:complete len:464 (+),score=84.29,Atg14|PF10186.5|2.9e-64,APG6|PF04111.8|7.2e-08 R_Transcript_54416:500-1891(+)
ATGATGAATCGGAAATCCTGTAGCTGTGCGATATGTGAGTGCTCTAATGTTGCTTCAATTTGTACACCTTGCGTGAATAATAGATTGAATGATCACTTTACTAAGATAAACGCATTGAAGAATCGTCGGCATCCCTTGTACTTGAAGCTTACTGAAAAGCTGGCTGCCAAGAAAAAGGCTGATGAACAGCTTGCGTGGATAATTCTTCACAATGAGAAGATTGTTAGATTGAAAGAGAAGCTTCGAATAAGTCGAGAAGAACTCCTACGTGACAAGTCTAAGAAGGAAAAAATGTCTCATGACCTCAAAGTCAGATATGGATTGCTTGATTCTTCTACAAATATGTTAGAGAAGAATCGGGTTGAACAACTGGAGAAGTCTTATCCTAATTGGATATGCACGCAGAGCCTAGGACATATGGCAATAACTTCAGAGCGCCTACATAAACAGTCAGTTATTATGAAACAGATCTGCAGAGTGTTCCCACAGCGCCGGGTAAAGGTGGATAATGAGAAGGACGGATTCAGTGGCCAATATGATGTAATTTGCAATGCTCGCTTACCTAGAGGGTTAAATCCTCATTCTGTTCCATCTGAGGAGCTTGCTGCATCACTGGGGTACATGGTGCAATTGCTGAATCTTGTTGTTCGAAACCTGGGACTTCCTGCACTTCATCACTCTGGTTTTGCTGGTTCTTGTTCTCGAATATGGCAACGAAGCTCGTATTGGGATGCCCGTCCATCATCACGAAGCAATGAGTATCCTCTTTTCATTCCCCGGCAAAACTGCTGTACAAGTGGAGGAGAAAATTCATGGTCTGATAGGAGCTCAACCAATTTTGAAGTTGCATCAGTAGAATCTGAGAGGAAACTCCGACTTGATCCTTCTATCAGCTTTAACTATTCTTGTGCTTCACCACATTCAATAGAGACACATAATGACTTGCAGAAAGGGATTTCTCTTCTCAAGAAAAGTGTGGCATGTGTGACGGCATACTGTTATAACTCTCTATGTCTGGATGTTCCCAGTGATGCTTCAACATTTGAAGCTTTTGCAAAGCTGTTGGCAACCCTTTCGTCATCAAAGGAAGTGCGATCTGTTTTCTCCTTGAAAATGGCCTGTTCAAGATCTTGTAAGCAAGTCCAGCAACTGAACAAATCTGTGTGGAATGTGAATTCAATGACAGCATCAAGTACAATGGCAGGAAGTGCGTACACACAATTTGTCCCGAGAAATATGCGTGATATATGTGATGTTGGAAAGAATGAAAGCCTTTTTGATGGATGGGACTTGGTGGAGCATCCAACTCTTCCTCCACCATCTGAAACTGAAGATGTTGAACATTGGACTCGGGCTATGTTTACTGATGCAACAAAAAGTAAACGATGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54416.p1 GENE.R_Transcript_54416~~R_Transcript_54416.p1 ORF type:complete len:464 (+),score=84.29,Atg14|PF10186.5|2.9e-64,APG6|PF04111.8|7.2e-08 R_Transcript_54416:500-1891(+)
MMNRKSCSCAICECSNVASICTPCVNNRLNDHFTKINALKNRRHPLYLKLTEKLAAKKKADEQLAWIILHNEKIVRLKEKLRISREELLRDKSKKEKMSHDLKVRYGLLDSSTNMLEKNRVEQLEKSYPNWICTQSLGHMAITSERLHKQSVIMKQICRVFPQRRVKVDNEKDGFSGQYDVICNARLPRGLNPHSVPSEELAASLGYMVQLLNLVVRNLGLPALHHSGFAGSCSRIWQRSSYWDARPSSRSNEYPLFIPRQNCCTSGGENSWSDRSSTNFEVASVESERKLRLDPSISFNYSCASPHSIETHNDLQKGISLLKKSVACVTAYCYNSLCLDVPSDASTFEAFAKLLATLSSSKEVRSVFSLKMACSRSCKQVQQLNKSVWNVNSMTASSTMAGSAYTQFVPRNMRDICDVGKNESLFDGWDLVEHPTLPPPSETEDVEHWTRAMFTDATKSKRC*

Click here to download the sequence:
Link to NCBI Protein BLAST