Transcript Information: R_Transcript_54426.p1


Annotated TAIR IDAT4G25500.1
Annotated Gene Namearginine/serine-rich splicing factor 35
Annotated Gene Symbol(s)ATRSP35, ATRSP40, AT-SRP40, RSP35, RS40, At-RS40
Annotation TypeOrtholog
Chromosome Positionchr4:13025168-13027243 | Forward length=350
E-Value5.6E-112
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 159.774963737209
Replicate 251.048257119015
Replicate 357.004553101876
Condition 2: 8 Hour
Replicate 152.149284887644
Replicate 255.304776462169
Replicate 355.147641426824
Condition 3: 24 Hour
Replicate 169.837299085802
Replicate 262.630200819044
Replicate 360.817744320844


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54426.p1 GENE.R_Transcript_54426~~R_Transcript_54426.p1 ORF type:complete len:262 (+),score=46.16,RRM_1|PF00076.18|3.7e-14,RRM_1|PF00076.18|2.7e-14,RRM_6|PF14259.2|6.3e-11,RRM_6|PF14259.2|3.7e-10,RRM_5|PF13893.2|4.9e-06,RRM_5|PF13893.2|9.9e-10,Nup35_RRM_2|PF14605.2|3.8e+02,Nup35_RRM_2|PF14605.2|5.9e-06 R_Transcript_54426:654-1439(+)
ATGAGGGCCATCTTTTGTGGCAACTTGGAATTTGATGCGCGCCATTCTGAGGTTGAGCGTCTTTTCAAAAGATATGGCAGGGTTGAAAGGGTCGATATGAAGTCTGGATTTGCATTTGTCTATATGGAAGATCAAAGAGATGCTGATGATGCTATCAGAAAACTAGACCGGTACGAGTTTGGCAGGAGGGGACGCCGTCTTCGTGTTGAGTGGACTAAGCAAGAAAGAGACAACCGAAGATCAGGTGGTGGACGAAAGCCTGCAGCTAATGACAGGCCCTCTAAAACCTTGTTTGTCATTAATTTTGACCCAATTTACACAAAATCCAAGGACTTGGAAAGACACTTTGATCCATATGGGAAGATAGTTAACATACGGATCCGGAGAAACTTTGCATTCATTCAGTTTGAAACCCAGGAGGATGCAACCCGGGCATTGGAAGCGACGAATATGAGCAAGATTATGGATAGGGTTATAACTGTGGAATATGCGATTCGAGATGATGACAGAAAGGATGGCTACAGTCCTGAGAGAAGGGGTAGGGACTTGTCTCCTGAGAGAGGTGGTTATGACTGTAGGAGGTCCCCAAGTCCTTATCGCAGGGATAGGGGCAGTCCAGACTATGGATATCGAAGAGCGAGGGGCAGCCCTGACTATGGCCGCGGGTCAAACCTGAGATCCAACCCTGATGCTAGGGGCAGTCCTACTTATAGTAGGGATGAAAGCCCTGCTAATGGAAGATACCACAGCCGCTCTCCCCCAGCACGTGATAGGTCAAGATCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54426.p1 GENE.R_Transcript_54426~~R_Transcript_54426.p1 ORF type:complete len:262 (+),score=46.16,RRM_1|PF00076.18|3.7e-14,RRM_1|PF00076.18|2.7e-14,RRM_6|PF14259.2|6.3e-11,RRM_6|PF14259.2|3.7e-10,RRM_5|PF13893.2|4.9e-06,RRM_5|PF13893.2|9.9e-10,Nup35_RRM_2|PF14605.2|3.8e+02,Nup35_RRM_2|PF14605.2|5.9e-06 R_Transcript_54426:654-1439(+)
MRAIFCGNLEFDARHSEVERLFKRYGRVERVDMKSGFAFVYMEDQRDADDAIRKLDRYEFGRRGRRLRVEWTKQERDNRRSGGGRKPAANDRPSKTLFVINFDPIYTKSKDLERHFDPYGKIVNIRIRRNFAFIQFETQEDATRALEATNMSKIMDRVITVEYAIRDDDRKDGYSPERRGRDLSPERGGYDCRRSPSPYRRDRGSPDYGYRRARGSPDYGRGSNLRSNPDARGSPTYSRDESPANGRYHSRSPPARDRSRS*

Click here to download the sequence:
Link to NCBI Protein BLAST