Transcript Information: R_Transcript_54435.p1


Annotated TAIR IDAT1G28440.1
Annotated Gene NameHAESA-like 1
Annotated Gene Symbol(s)HSL1
Annotation TypeOrtholog
Chromosome Positionchr1:9996914-10000171 | Forward length=996
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.257973274063
Replicate 26.5233788714788
Replicate 39.0186275064097
Condition 2: 8 Hour
Replicate 114.475920157491
Replicate 215.554173154938
Replicate 324.567462927719
Condition 3: 24 Hour
Replicate 115.536226777993
Replicate 210.653106181109
Replicate 314.123764156451


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54435.p1 GENE.R_Transcript_54435~~R_Transcript_54435.p1 ORF type:3prime_partial len:795 (+),score=76.79,LRR_8|PF13855.2|3.4e-06,LRR_8|PF13855.2|0.0077,LRR_8|PF13855.2|0.0027,LRR_8|PF13855.2|0.00013,LRR_8|PF13855.2|0.019,LRR_8|PF13855.2|3.9e-07,LRR_8|PF13855.2|1.5e+03,LRR_8|PF13855.2|0.21,LRR_8|PF13855.2|0.0076,Pkinase|PF00069.21|2.2e-12,LRRNT_2|PF08263.8|5.6e-11,LRR_4|PF12799.3|1.1e+02,LRR_4|PF12799.3|0.005,LRR_4|PF12799.3|0.81,LRR_4|PF12799.3|6.6e+02,LRR_4|PF12799.3|15,LRR_4|PF12799.3|32,LRR_4|PF12799.3|73,LRR_4|PF12799.3|0.39,LRR_4|PF12799.3|3.1e+02,LRR_4|PF12799.3|7.5e+02,LRR_4|PF12799.3|0.31,LRR_4|PF12799.3|0.23,Pkinase_Tyr|PF07714.13|3.2e-09,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|18,LRR_1|PF00560.29|3.5,LRR_1|PF00560.29|8.2e+02,LRR_1|PF00560.29|93,LRR_1|PF00560.29|77,LRR_1|PF00560.29|9.4e+02,LRR_1|PF00560.29|1e+03,LRR_1|PF00560.29|5.8e+02,LRR_1|PF00560.29|1.3e+03,LRR_1|PF00560.29|1.6e+02,LRR_1|PF00560.29|4.1e+02,LRR_1|PF00560.29|6.8e+02,LRR_1|PF00560.29|3.3e+03,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|7.4e+02,LRR_1|PF00560.29|56,LRR_1|PF00560.29|5,LRR_1|PF00560.29|5.7 R_Transcript_54435:640-3021(+)
ATGCTACTCATTCTATTCTCTCTCCTGTTTCTCTCTCCTCTCACTCACTCTCTAAACCAAGAAGGCCTCTACCTCCAGTCTCTCAAAACCTCCTTCGATGACCCGGACAACTTCTTCTCCACCTGGTCCGACCGCTCCGACACCGCATGCAACTGGACCGGAGTCACCTGTGAACAGTCCTCCGGTTCTGTCACTTCCCTCGACTTCTCCAACGCCAACCTTGCCGGTCCGTTCCCTCTCATTCTCTGCCGGCTCAAGTCTCTCTCATTTCTCTCCTTCCTCAACAACTACATCAACGAATCCCTGCCGTCAGATGTCTCCACGTGTCGGAATCTTAGCCACCTCAACCTCGCTCAGAACCTCCTCGTGGGTCCCATTCCTGGTTCATTGAGTGACCTTCCGGAACTGGTTTCTCTCGACCTCAGTGGCAACAACTTCTCCGGAGATGTTCCATCGTCCTTTGGAAGGTTTCAGAAACTTGAGGTTCTCTCTTTGGTCAGTAACTTGCTTGACGGGAAATTCCCGTCGTTTTTAGGGAATGTCTCGACGCTTAAGCAGCTTAACTTGACTCAGAACCCGTTCCAGCCGAGTCCACTCGGTCACGAACTCGGTGGGCTGGCGAATGTCGAGATTCTCTGGGCTGCGCAGTGTAACTTGGTGGGAGAGATTCCCGACTCGCTGAGTCGACTCGGGAAGTTATCCGTGTTCGACATGTCCTACAACTCGCTCACCGGGTCGTTCCCGAGTTGGCTCACCGAGTTGACGAGCCTAGCCCAGGTGGAGCTCTACGCCAACAACCTCACCGGGGAGATCCCAAAGACGGGGTGGTCCAAGATGACATCACTCAGGTTCCTCGACGCGAGCATGAACGGGTTGACCGGGACGATTCCGGACGAGTTGGCTCGCCTCCAGCTTGCTTCGCTCAACCTGTACGAGAACTTGCTCGAGGGGGAGATACCGGCCTCCATAGCGGACTCGCCCAACCTGTACGAGCTCAAGCTGTTCTCGAACAAACTGACGGGCGAGTTGCCTCGGAAGCTCGGTGGAATTTCGCCCCTCAGCCTAATCGACGTGTCGACCAACCGGCTGACCGGCGAAATTCCACCGGGCATTTGCTCAAAGGGAAAGCTGGAGGAGCTCCTTTTGATGCAAAACTCGCTCTCGGGTCAGATCCCCGAGAGCCTTTCCGAGTGCCGGACCCTCACTCGGGTCCGGCTAAGCAACAACAAGCTTAGCAACGAAGTGCCTGAAGGCTTCTGGGGGCTGCCTCATTTATCATTACTTGAGCTCTTTCACAACTCTCTTACAGGCCCAATACCCAAAACAATAGCCTCAGCTTCTAACTTGTCACAGTTACTTATTTACAACAACAGTTTTAGTGGGGAAATACCTGAGGAAGTTGGGTTTTTGGGGAGTTTAGTGAGTTTCATGGCTGGTGATAATAAATTGTCAGGGCCATTACCTTCTTCATTGGTGAACTTGGGGCAGTTAGGGAGATTAGATTTGCATAAGAATGAGTTATCAGGGGAGTTACCAAGTGGGATTAAGTCCATGAAGATGCTTAATGATCTTAATTTGGCTAACAATGATTTTTCTGGCAAAATCCCAGCTGATATTGGGAGCTTATCAACACTTAATTACCTTGATTTATCTAGGAACAGATTCTCTGGTCAAGTCCCTGATGAGCTCCAGAATTTGAGGCTTAATGAGCTTAATTTGTCAAACAATCTTTTAACAGGGCAAATCCCACCTTTATTTGCTAAGGAGATTTACAGAGATTCTTTCTTAGGGAACCCTGGGTTGTGTGGGGACATATCAGGGTTATGTGATAACAGAGTTGAGGAGAAGAAACAGGGCTATTTATGGCTCCTAAGATCAATCTTTGTTCTTGCTGCTATTGTCTTCATTGTGGGTGTTGTCTGGTTCTACATGAAGTACAAGAACTTCAAGCAAGTTAAAGGAGCCATTGATAAATCCAAATGGACATTAATGTCATTCCACAAACTGGGTTTCAGTGAATGCGAAATCTTGGACTGTTTAGATGAAGATAATGTCATAGGTTCAGGTGCTTCAGGGAAAGTCTACAAGGCTGTTCTTAGCAATGGCGAGGCCGTAGCAGTGAAGAAGTTATGGGGTTGTTCTAACAAGCTTGTGGATCAAGGCAGTGATCTCGAAAAGGGTATTAGCCCTCAAGATGATGGGTTCGAAGCTGAGGTAGAAACTTTGGGAAAAATCAGGCACAAAAATATTGTCAGATTATGGTGTTGTTGTAAAACAAAGGACTGTAAGCTCCTTGTATATGAGTACATGCCTAATGGGAGTTTAGGTGACTTGATACATGGCCCTAAAGGTGGATTGTTGGATTGGCCTACGAGGTATCGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54435.p1 GENE.R_Transcript_54435~~R_Transcript_54435.p1 ORF type:3prime_partial len:795 (+),score=76.79,LRR_8|PF13855.2|3.4e-06,LRR_8|PF13855.2|0.0077,LRR_8|PF13855.2|0.0027,LRR_8|PF13855.2|0.00013,LRR_8|PF13855.2|0.019,LRR_8|PF13855.2|3.9e-07,LRR_8|PF13855.2|1.5e+03,LRR_8|PF13855.2|0.21,LRR_8|PF13855.2|0.0076,Pkinase|PF00069.21|2.2e-12,LRRNT_2|PF08263.8|5.6e-11,LRR_4|PF12799.3|1.1e+02,LRR_4|PF12799.3|0.005,LRR_4|PF12799.3|0.81,LRR_4|PF12799.3|6.6e+02,LRR_4|PF12799.3|15,LRR_4|PF12799.3|32,LRR_4|PF12799.3|73,LRR_4|PF12799.3|0.39,LRR_4|PF12799.3|3.1e+02,LRR_4|PF12799.3|7.5e+02,LRR_4|PF12799.3|0.31,LRR_4|PF12799.3|0.23,Pkinase_Tyr|PF07714.13|3.2e-09,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|18,LRR_1|PF00560.29|3.5,LRR_1|PF00560.29|8.2e+02,LRR_1|PF00560.29|93,LRR_1|PF00560.29|77,LRR_1|PF00560.29|9.4e+02,LRR_1|PF00560.29|1e+03,LRR_1|PF00560.29|5.8e+02,LRR_1|PF00560.29|1.3e+03,LRR_1|PF00560.29|1.6e+02,LRR_1|PF00560.29|4.1e+02,LRR_1|PF00560.29|6.8e+02,LRR_1|PF00560.29|3.3e+03,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|7.4e+02,LRR_1|PF00560.29|56,LRR_1|PF00560.29|5,LRR_1|PF00560.29|5.7 R_Transcript_54435:640-3021(+)
MLLILFSLLFLSPLTHSLNQEGLYLQSLKTSFDDPDNFFSTWSDRSDTACNWTGVTCEQSSGSVTSLDFSNANLAGPFPLILCRLKSLSFLSFLNNYINESLPSDVSTCRNLSHLNLAQNLLVGPIPGSLSDLPELVSLDLSGNNFSGDVPSSFGRFQKLEVLSLVSNLLDGKFPSFLGNVSTLKQLNLTQNPFQPSPLGHELGGLANVEILWAAQCNLVGEIPDSLSRLGKLSVFDMSYNSLTGSFPSWLTELTSLAQVELYANNLTGEIPKTGWSKMTSLRFLDASMNGLTGTIPDELARLQLASLNLYENLLEGEIPASIADSPNLYELKLFSNKLTGELPRKLGGISPLSLIDVSTNRLTGEIPPGICSKGKLEELLLMQNSLSGQIPESLSECRTLTRVRLSNNKLSNEVPEGFWGLPHLSLLELFHNSLTGPIPKTIASASNLSQLLIYNNSFSGEIPEEVGFLGSLVSFMAGDNKLSGPLPSSLVNLGQLGRLDLHKNELSGELPSGIKSMKMLNDLNLANNDFSGKIPADIGSLSTLNYLDLSRNRFSGQVPDELQNLRLNELNLSNNLLTGQIPPLFAKEIYRDSFLGNPGLCGDISGLCDNRVEEKKQGYLWLLRSIFVLAAIVFIVGVVWFYMKYKNFKQVKGAIDKSKWTLMSFHKLGFSECEILDCLDEDNVIGSGASGKVYKAVLSNGEAVAVKKLWGCSNKLVDQGSDLEKGISPQDDGFEAEVETLGKIRHKNIVRLWCCCKTKDCKLLVYEYMPNGSLGDLIHGPKGGLLDWPTRYR

Click here to download the sequence:
Link to NCBI Protein BLAST