Transcript Information: R_Transcript_5444.p2


Annotated TAIR IDAT3G52590.1
Annotated Gene Nameubiquitin extension protein 1
Annotated Gene Symbol(s)UBQ1, EMB2167, ERD16, HAP4
Annotation TypeOrtholog
Chromosome Positionchr3:19505668-19506681 | Forward length=128
E-Value5E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1346.52326649695
Replicate 2380.2120757556
Replicate 3365.79751510135
Condition 2: 8 Hour
Replicate 1299.14514075084
Replicate 2331.59974389293
Replicate 3328.69893340484
Condition 3: 24 Hour
Replicate 1407.54557016622
Replicate 2407.5948619778
Replicate 3369.20655347821


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5444.p2 GENE.R_Transcript_5444~~R_Transcript_5444.p2 ORF type:complete len:129 (+),score=29.00,ubiquitin|PF00240.19|2.9e-33,Ribosomal_L40e|PF01020.13|4.6e-31,Rad60-SLD|PF11976.4|3e-16 R_Transcript_5444:92-478(+)
ATGCAGATCTTCGTGAAAACCCTAACTGGGAAAACCATCACCCTTGAGGTCGAAAGCAGCGACACCATCGACAATGTCAAAGCCAAGATTCAAGACAAAGAAGGAATTCCACCAGACCAACAGCGTTTGATCTTCGCCGGTAAGCAGCTTGAAGATGGCCGTACTCTTGCTGATTACAACATCCAGAAAGAGTCGACACTTCACCTGGTGTTGAGGCTGAGGGGAGGAATCATTGAGCCCTCTTTGATGGCTTTGGCTCGTAAATTCAACCAAGACAAGATGATTTGCCGCAAGTGCTATGCTCGCTTGCACCCTAGGGCTGTCAACTGCCGAAAGAAGAAGTGTGGACACAGTAACCAGTTGAGGCCCAAGAAGAAGATCAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5444.p2 GENE.R_Transcript_5444~~R_Transcript_5444.p2 ORF type:complete len:129 (+),score=29.00,ubiquitin|PF00240.19|2.9e-33,Ribosomal_L40e|PF01020.13|4.6e-31,Rad60-SLD|PF11976.4|3e-16 R_Transcript_5444:92-478(+)
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKFNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK*

Click here to download the sequence:
Link to NCBI Protein BLAST