Transcript Information: R_Transcript_5447.p2


Annotated TAIR IDAT3G52590.1
Annotated Gene Nameubiquitin extension protein 1
Annotated Gene Symbol(s)UBQ1, EMB2167, ERD16, HAP4
Annotation TypeOrtholog
Chromosome Positionchr3:19505668-19506681 | Forward length=128
E-Value1.5E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.8798188428361
Replicate 212.295130874409
Replicate 33.5082390913026
Condition 2: 8 Hour
Replicate 14.8530543138684
Replicate 22.2159432455229
Replicate 33.9246725665702
Condition 3: 24 Hour
Replicate 16.6184669485273
Replicate 26.3582728333196
Replicate 33.3521709880834


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5447.p2 GENE.R_Transcript_5447~~R_Transcript_5447.p2 ORF type:3prime_partial len:111 (-),score=17.80 R_Transcript_5447:3-332(-)
ATGAAATTCAACTTCAAGGATGATGGTACAGCAACGAGAAAAAGATTACTTGATCTTCTTCTTGGGCCTCAACTGGTTACTGTGTCCACACTTCTTCTTTCGGCAGTTGACAGCCCTAGGGTGCAAGCGAGCATAGCACTTGCGGCAAATCATCTTGTCTTGGTTGAATTTACGAGCCAAAGCCATCAAAGAGGGCTCAATGATTCCTCCCCTCAGCCTCAACACCAGGTGAAGTGTCGACTCTTTCTAGATGTTGTAATCAGCAAGAGTATGGCCATCTTCGAGCTGCTTACCGGCGAAGATCAAACGCTGTTGGTCTGGTGGAATTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5447.p2 GENE.R_Transcript_5447~~R_Transcript_5447.p2 ORF type:3prime_partial len:111 (-),score=17.80 R_Transcript_5447:3-332(-)
MKFNFKDDGTATRKRLLDLLLGPQLVTVSTLLLSAVDSPRVQASIALAANHLVLVEFTSQSHQRGLNDSSPQPQHQVKCRLFLDVVISKSMAIFELLTGEDQTLLVWWNS

Click here to download the sequence:
Link to NCBI Protein BLAST