Transcript Information: R_Transcript_54470.p1


Annotated TAIR IDAT1G09320.1
Annotated Gene Nameagenet domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:3010270-3012228 | Reverse length=517
E-Value3E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.082849482634
Replicate 210.938426777922
Replicate 314.367413235984
Condition 2: 8 Hour
Replicate 113.532262734125
Replicate 215.983966796076
Replicate 316.832108636799
Condition 3: 24 Hour
Replicate 119.213523663074
Replicate 213.46336866107
Replicate 316.8900461144


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54470.p1 GENE.R_Transcript_54470~~R_Transcript_54470.p1 ORF type:complete len:1073 (+),score=264.90,DUF724|PF05266.10|4.9e-61,Agenet|PF05641.8|6.1e-16,Agenet|PF05641.8|0.58,Agenet|PF05641.8|1.6e-08,Agenet|PF05641.8|0.43 R_Transcript_54470:83-3301(+)
ATGCAACTCAAAACCAAACGACTCGAAAACCAAAGGCAGAGACAAGAACAATCCAGTACCAGTGGTACTACTACTGTCAACAACACCCAATTCAATTTCTCTCAAATTTTCCCAGTTGGATCCCAAGTTGAAGTCAGCTCTGACGACGAAGGCTTTAAAGGTGCTTGGTATCTTGCCACTGTTCTCAATCCCCCTTCTTCATTTTCTCTCTCCTCCAATTCCAAACAACAACAGCTCTACGTTGAGTACAAGACTTTACTCTCAGACGAAAATGGGCATGCCCTTTTGAAAGAATTCGTTGATGTTTCTTTTGTTAGACCCAAACCGCCCCTTGATGAAAAAGTTGATTCCTTTGATGTCAACGACGTCGTTGATGCGTTTTATCTAGATGGGTGGTGGACTGGGGTTGTCACTCAGGTTGTCAATGATGATGATGATAATGGGAAGAGCAGAAAGTATCAGGTTTTCTTCTCAAGTCCTCCAGATGAGATGGAATTTGAGCCTTCTGATTTGCGTGTTCATAGGATTTGGGTTGATGGCAATTGGGTTCTCCCCCAAAACCAGAGAATGAGGGAATTGAATTTTAGTTCAGGGACTGCTGTAGAAGTGAACATTGATCCAGATAATTCATCTGATGTTTGGTTTCATGCGACGTTCATTAAACAAGTGACTAGCAACTCTTTCTTGGTGGAGTATCAAAGCTCAAGCGAAACAGGACGTCAGAAAGTTGCTGTAGATTCTCTTCATATTAGACCTTCACCACCTCCTTCAAGTAACAGACCCTTTAGTTTGTTGGAAAAGGTGGACGCATTCTATAATTGTCGTTGGTTGAGTGGGGTAGTCACCAAAATTCTTGCAGACGGAAGGTACATAGTCTATTTTAAGCGCACGAAAAAGGAGAAGGAGCTTTGTCAAACTGATTTGAGGCCCCACATGGAGTGGTCTAATGGTAAATGGGTTCATCATTCCCAGGACACATCAACGGCATCAAATTTTAAAAAGAAGTTTGACCATGCTGTAAATGGTGGTTATAAAGAAAAGAATGTTGTATTAGACAGAGGTAGTCAGGAAAATGTTGAAGAGGAGGAAAGGGTTTCAGCTCCAACTCTGAAGAGCTGTCAGAAAGTCCGGCAAACTCCAGGTAGTGAAAATGTAAATCATAATAGCACAACTCCCAGCAAGAGAATAAAGAAGACAAGTGCAAATGGTGATTCTAATTATCTGAAGCCTCCAAAGAGATTAAGCGAAAAGAATGTATCCAATGTGGCAGTATCTCCAGAAGCATGCAATTCAAATATGAAGGAAACTGGGGCATCAAACAATGGTATGCCAGCAGATTTTGACACCTCAACACCTAATATCCCAGAAAAGTCTAGTGTCGAACAATTGGAAGAATCCAACCAGCCTTCTGCTTCTCCAGAAATTAAGGAGAATGATGAAAAGTTTTCATTTTCACGAAAGAGGGGAAGAGGAAGACCACGAAAGATACGAACTATATTGTCAGATATTGATGGAATGCCATTGAAAAGTGACGTGGTTCCACCACTTGGACCTATAGTCCTGGGGTTGACACATAACGGCAAAATGGCCGGGAGCTCAGGCCAGTACATGAAAGATGAGCTTAAGAAGGTTGTGGAAGATGATGAAAAACGGTGTGACACATCAGCAGACCATGAAGGCATAGTAAATGATGGAGGTGAGGACCAGAAAGATGAAGTGACTAATTTGTTGAGAAAGAGAGGCAGAGGCAGACCACCTAAGGTCCTCTTTCGTGTAGGCAGTCGAAAGACCAAAGAAGCAGAACATTTGGAGGAGGGAAAACATTCTGTTTCTGATGCCAAAGGTACTCCTGTTTCTGATGCCAAAGATACGCTTGTTTCTGATGCTAAAGATAGCCCACTTTCTGATGTCAAAGAAACCTCACTTTCGGATGCCAAAGATTCACCACTTTCTGATGCAAAAAATACTCCTCAAAGGCATTCTCCAGTTAATGAAGTTGAGAAGACCTTGGCTGTTGTTGAGCCTGTTGGAATCAGCGACTCAACTCCTTCTACTGAATCTCGTAAAAGAAGTTTGAGGATAGTTACCAATCAAATCAAAAGTCTGAGTGATATTCACAAACTGAATACAAGAAGTAGAGGCAGTAGACCCCGGAAATTCCCTAAAATAACAGCAATGGAGGAAATGAATGAGCCTGTCAGATTACTGAAGCTGAAGAGGCCAAAGAGGCATAGATTGTACAAACAGGTTGAACCCCCAGCTGAAGATGCTGTAGATAACAAAGGACGGAGAGCGGCTGAAGTTCCAAACAATGGCGTAGCAAAAGATGTTCAAAAGGTTGTTGCTGCAAGCTCAAGCAACGTGTCAGATGATGATAGGCCATTATCAACTTGGTTTGAAGGGGCACACTCTCCCCCAAGAACTGACGGAAGGTTGCCTCTAGCTGGGACAGCTGGTCACTGTGACGAGACTGGAGGAAGACAAAGTGATAGCAAGATGCAGCCTGCTGGTCAACCTAAAGAGAAGGCACAGGAGAAAAGGGATGAGAAAACTCTCGTTGAATGTGTCAGCCAAGACAACAATGTCCTGGAAAGGCAAGATGAAATCGAAACATCATCTACTGCAATTGTTCCCATGAACAATCACCAAGACTTACCATTTGTGAAAAACTCTCTCGTTTGGGAAATGATTGAATCCATGGAAGTTTTCAAGCGGATTCCTCAAAAGCCTCATTTCCGCCCACTATATAACTGCAAGGAGGAATGCCGTGAAGGATTAGCCATAGGAAATATGGTTACATTCACTAGTTTGGTTGAGAGAGTATCGAAACTTCAGTTTGATGATCCCAAAAGCCTCATAGATGGGTATCTTGAAGCTCTTGTTGACTTGGAAGAATTGGGATTTAACGTGGCACCCGTGAGAGATCAGTTAAATACACTGTTGTCCATTAAAGGCAGATCCGAACAGGCCCAGAATACATTCAAAGAGATCGAGAGCCAGATCGTGGAGCAAACCCATGAGAAAGAAAAAATCGACGAGGAGATATTTGAGCTGGATAAGAAAATAGCAGAGCTGAATGAGAAGCGAGCTCTGGCCATTACAAAGAAAGAGATGAAGGATACTGAGATTCAAGTGCTCCAGTCGAGTGTGGACACAATGAAGGCATCCCTTCAAAGCTCTGAGGTAGAGTTTGAGAAAGTAACTGCTTCACTTTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54470.p1 GENE.R_Transcript_54470~~R_Transcript_54470.p1 ORF type:complete len:1073 (+),score=264.90,DUF724|PF05266.10|4.9e-61,Agenet|PF05641.8|6.1e-16,Agenet|PF05641.8|0.58,Agenet|PF05641.8|1.6e-08,Agenet|PF05641.8|0.43 R_Transcript_54470:83-3301(+)
MQLKTKRLENQRQRQEQSSTSGTTTVNNTQFNFSQIFPVGSQVEVSSDDEGFKGAWYLATVLNPPSSFSLSSNSKQQQLYVEYKTLLSDENGHALLKEFVDVSFVRPKPPLDEKVDSFDVNDVVDAFYLDGWWTGVVTQVVNDDDDNGKSRKYQVFFSSPPDEMEFEPSDLRVHRIWVDGNWVLPQNQRMRELNFSSGTAVEVNIDPDNSSDVWFHATFIKQVTSNSFLVEYQSSSETGRQKVAVDSLHIRPSPPPSSNRPFSLLEKVDAFYNCRWLSGVVTKILADGRYIVYFKRTKKEKELCQTDLRPHMEWSNGKWVHHSQDTSTASNFKKKFDHAVNGGYKEKNVVLDRGSQENVEEEERVSAPTLKSCQKVRQTPGSENVNHNSTTPSKRIKKTSANGDSNYLKPPKRLSEKNVSNVAVSPEACNSNMKETGASNNGMPADFDTSTPNIPEKSSVEQLEESNQPSASPEIKENDEKFSFSRKRGRGRPRKIRTILSDIDGMPLKSDVVPPLGPIVLGLTHNGKMAGSSGQYMKDELKKVVEDDEKRCDTSADHEGIVNDGGEDQKDEVTNLLRKRGRGRPPKVLFRVGSRKTKEAEHLEEGKHSVSDAKGTPVSDAKDTLVSDAKDSPLSDVKETSLSDAKDSPLSDAKNTPQRHSPVNEVEKTLAVVEPVGISDSTPSTESRKRSLRIVTNQIKSLSDIHKLNTRSRGSRPRKFPKITAMEEMNEPVRLLKLKRPKRHRLYKQVEPPAEDAVDNKGRRAAEVPNNGVAKDVQKVVAASSSNVSDDDRPLSTWFEGAHSPPRTDGRLPLAGTAGHCDETGGRQSDSKMQPAGQPKEKAQEKRDEKTLVECVSQDNNVLERQDEIETSSTAIVPMNNHQDLPFVKNSLVWEMIESMEVFKRIPQKPHFRPLYNCKEECREGLAIGNMVTFTSLVERVSKLQFDDPKSLIDGYLEALVDLEELGFNVAPVRDQLNTLLSIKGRSEQAQNTFKEIESQIVEQTHEKEKIDEEIFELDKKIAELNEKRALAITKKEMKDTEIQVLQSSVDTMKASLQSSEVEFEKVTASLW*

Click here to download the sequence:
Link to NCBI Protein BLAST