Transcript Information: R_Transcript_54486.p1


Annotated TAIR IDAT1G10150.1
Annotated Gene NameCarbohydrate-binding protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:3326160-3327404 | Forward length=414
E-Value4E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.018241707264
Replicate 28.1154239811309
Replicate 39.6774531866891
Condition 2: 8 Hour
Replicate 19.4641994852274
Replicate 215.1752501484
Replicate 314.480498360084
Condition 3: 24 Hour
Replicate 111.607880058951
Replicate 29.8629135263481
Replicate 311.902976481414


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54486.p1 GENE.R_Transcript_54486~~R_Transcript_54486.p1 ORF type:complete len:445 (+),score=95.64 R_Transcript_54486:578-1912(+)
ATGGATTTACAATTGGTGAACAAGGGTTTGGATTTGACCCGTAAAAGGAAGAAGTGGGTTGTTCTTTTAGCAGCTCTTGGGGTCACTGGATATGGTGCTTATAGGGTCTACAATTTGCCATCTGTTGCGAGAAAAAGAAAAAAAATGGTTAAGTTTATGAGTGCACTTATTACATTAGCTGAGGCTATGTCTAATTCAGTTGAGACTATTGGGGTTCTTTCCAAAGATATAAGGGAGTTTCTGCTATCTGATTCTGATGAAATACCAAATAGTTTAAAACAGGTTTCCAAAATTGCCAAGTCTAAGGAGTTCTCTGACTCTGTTGTTAGGATAACAGCAGCTTTTACCAAAGGGGTTTTGAAGGCTTATCAGGGAGATGGAGAATCCCACGAGGTCGATTCTAGTTCTGGTTTTTACAATCAGTTTATGGATAAGCTCTTCTCGGATGCTGGGTCTGGGTTTGCTTCGGTTGTTGTGGGTAGTTTTGCTAGGAATTTGGTCATGGCATTCTATTCCAATGATGAATCTAAGGCAAAGGGAGCGAGGGTGGATATTGCTGATGTTTCAGTCTCAGCTGATGCTTCTTTGCCTAAATGGGTTGATGTCATGTGCCACGAGCGTTCTAGGGATCTCATTGGTGATTGCATTCAAACGTTTGTGAGCACTGCAGTGGCGGTTTATCTTGAAAAAACTATGAATGTTAACACCTATGATGAGTTATTTGCTGGGTTGACTAATCCTAAACATGAGAAACAAGTGAGAGATATGTTGGTGACTTTGTGCAATGGATCCATCGAGACTTTGGTGAAGACTTCTCATCAGGTTCTGACGAGTTCAGATTCTGGTAGGAAGTTGGGTTCAGAACCTTCTGATTTGTCTCGCTTTGTGGTGACACGCTCCAATTCAGATCTGGTGTCAAAGACTTTATACCCGGGGATTAATGATGCGCATAATGTGATTACAGTAAAACACAGTGGACACGGACGAGGAGCTTTCTTTGATTTTGAGGAAGCTCGGAAGTCAACTGATGAGAGTGAAAAGAGTAGTTGGATGTCAACAATGTCTTCTACCTTATCTGTTCCAAGCAATAGGAAATTTGTTCTAGATGTGACTGGGAGGGTGACGTTCGAGACTGTAAGGTCTTTTATGGAGTTTTTGCTTGAGAAATTGTTTGGTAGCGTGAAAAGAGGTGTCCGTGTTGTCAACGAAACCATTGTTGACACAGGACTCGAAGTCATAAGATATGTCACAGCAAAGGCTTCTATTGTTGCAACTATATGTCTCTCCCTGTGGCTGCATGTAATAGGTGACCCTTGGTCTCTGATGCCTGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54486.p1 GENE.R_Transcript_54486~~R_Transcript_54486.p1 ORF type:complete len:445 (+),score=95.64 R_Transcript_54486:578-1912(+)
MDLQLVNKGLDLTRKRKKWVVLLAALGVTGYGAYRVYNLPSVARKRKKMVKFMSALITLAEAMSNSVETIGVLSKDIREFLLSDSDEIPNSLKQVSKIAKSKEFSDSVVRITAAFTKGVLKAYQGDGESHEVDSSSGFYNQFMDKLFSDAGSGFASVVVGSFARNLVMAFYSNDESKAKGARVDIADVSVSADASLPKWVDVMCHERSRDLIGDCIQTFVSTAVAVYLEKTMNVNTYDELFAGLTNPKHEKQVRDMLVTLCNGSIETLVKTSHQVLTSSDSGRKLGSEPSDLSRFVVTRSNSDLVSKTLYPGINDAHNVITVKHSGHGRGAFFDFEEARKSTDESEKSSWMSTMSSTLSVPSNRKFVLDVTGRVTFETVRSFMEFLLEKLFGSVKRGVRVVNETIVDTGLEVIRYVTAKASIVATICLSLWLHVIGDPWSLMPA*

Click here to download the sequence:
Link to NCBI Protein BLAST