Transcript Information: R_Transcript_54533.p1


Annotated TAIR IDAT3G11710.1
Annotated Gene Namelysyl-tRNA synthetase 1
Annotated Gene Symbol(s)ATKRS-1
Annotation TypeOrtholog
Chromosome Positionchr3:3702359-3705613 | Reverse length=626
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1105.23836339922
Replicate 278.727754830489
Replicate 393.89205043399
Condition 2: 8 Hour
Replicate 184.236061708465
Replicate 289.586180518434
Replicate 3101.87482898428
Condition 3: 24 Hour
Replicate 1117.79149258616
Replicate 2110.34664615589
Replicate 3122.63398176247


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54533.p1 GENE.R_Transcript_54533~~R_Transcript_54533.p1 ORF type:complete len:627 (+),score=149.23,tRNA-synt_2|PF00152.16|3e+03,tRNA-synt_2|PF00152.16|8.2e-79,tRNA_anti-codon|PF01336.21|1.5e-13,tRNA-synt_2d|PF01409.16|0.0099,tRNA-synt_2d|PF01409.16|0.036 R_Transcript_54533:143-2023(+)
ATGGTGAATCCGGCTGACCAAGCCGCCAAATCTGTCGCCAATTTGTCCATGGATTCCAACCCTAACGCTCCTCCTTCTTCCGACTCCGAAACTCTCAGCAAGAATGCGTTGAAGAAGCAGTTGAAGAACAAGCAGAGAGAAGAAGAACGACGTCGTAAGGAAGAGGAGAAAGCTGCTAAGCAGGCGGCTAATGCATCATCACAAGGTCAGAAGTCCCAATTGGCTGATGACGAGGATATGGATCCCACTCAATACTTTGAAAACAGGGTGAAAGCCCTAGCTGCACAGAAGGCGGCTGGAGTCAACCCATATCCACACAAATTCTTTGTTACAATGCAAATTACCGAATACATTCAGAAGTATGGAGTATTGAACAATGCGGAGCATCTTGAAGATTTTCAAGTATCATTAGCTGGGAGGATCATGAGTAAGCGTGCGTCTTCTTCAAAGCTTTTCTTTTATGATTTGCATTGCGGTGGTGGCAAAGTGCAAGTGATGGCCGATGCGAGGTCTTCTGAGCTTGATGAAGCTGAATTTTCAAGGTTCCATGCCAGTGTGAAACGTGGTGACATTGTTGGTGTAACTGGATTCCCAGGAAAAACCAAAAGAGGAGAGCTGAGTATTTTCCCAAAGTCTTTTATTTTATTGTCTCATTGTCTCCATATGATGCCAAGACAGAAGACTGTTGGTGCTTCAGAGAATGTTAAGAAAGGTGAGGCTTGGGTTCCTGGAAGTCCAAGGAATCCTGATATGTACATCCTGAAGGATCAGGAAACTCGTTATCGACAACGTTACTTGGATTTGATGTTGAACAGCGAAGTTAGGGAGATATTCAAGACACGATCTAGGATTATCTCATATGTTAGGAGATTCCTTGACAACCTGGATTTCTTAGAGGTTGAAACCCCTATGATGAACATGATTGCTGGAGGTGCAGCTGCACGTCCATTTGTTACTCATCATAATGAGCTCAACATGAGGCTATTCATGCGTATTGCTCCAGAACTGTATCTGAAGGAGCTAGTAGTTGGCGGGCTAGATCGTGTATATGAGATTGGAAAGCAATTTAGAAATGAGGGTATTGACCTGACACATAATCCTGAGTTCACCACATGTGAATTCTATATGGCATTTGCAGATTACAATGATTTAATGGAGCTGACTGAGCAGATGTTGAGTGGGATGGTGAAGGAACTGACTGGTGGTTATGTCATCAAGTACCATTCAAATGGTCTAGATAAGGATCCAATTGAGATAGATTTTACTCCTCCATTCAGGAGGATTGACATGATAGAAGAATTGGAAAAAATGGCAAACCTCAGCATCCCAAAGGATTTGGCTAGCGAAGAAGCAAACAAATATCTGCTAGATGCGTGTCTGAAGTATGATGTTAAATGCCCACCTCCACAAACAACAACTCGTTTGTTGGATAAATTGGTGGGACACTTTTTGGAGGAGACTTGCGTCAATCCATCTTTCATAATAAATCATCCAGAAATAATGAGTCCCTTAGCCAAGTGGCATAGGTCAAGGCCAGGCCTTACTGAACGTTTTGAGTTGTTTGTTAACAAGCACGAGCTTTGCAATGCATACACCGAATTGAATGATCCTGTAGTGCAGCGGCAGCGATTTGCTGAACAACTGAAGGATAGACAATCGGGTGACGATGAAGCAATGGCTTTGGATGAGACATTTTGTACTGCCCTTGAGTATGGCCTGCCACCCACCGGTGGTTGGGGATTGGGTATTGATCGGCTTGCAATGATTCTAACAGATTCCCAAAACATAAAGGAAGTCTTGCTCTTCCCAGCAATGAAGCCTCAGGATGAGCCGCAAGCTAAAGCTCCAGCTCCAGCTCTTGCTTCAGCTTCTGGGTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54533.p1 GENE.R_Transcript_54533~~R_Transcript_54533.p1 ORF type:complete len:627 (+),score=149.23,tRNA-synt_2|PF00152.16|3e+03,tRNA-synt_2|PF00152.16|8.2e-79,tRNA_anti-codon|PF01336.21|1.5e-13,tRNA-synt_2d|PF01409.16|0.0099,tRNA-synt_2d|PF01409.16|0.036 R_Transcript_54533:143-2023(+)
MVNPADQAAKSVANLSMDSNPNAPPSSDSETLSKNALKKQLKNKQREEERRRKEEEKAAKQAANASSQGQKSQLADDEDMDPTQYFENRVKALAAQKAAGVNPYPHKFFVTMQITEYIQKYGVLNNAEHLEDFQVSLAGRIMSKRASSSKLFFYDLHCGGGKVQVMADARSSELDEAEFSRFHASVKRGDIVGVTGFPGKTKRGELSIFPKSFILLSHCLHMMPRQKTVGASENVKKGEAWVPGSPRNPDMYILKDQETRYRQRYLDLMLNSEVREIFKTRSRIISYVRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNELNMRLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEQMLSGMVKELTGGYVIKYHSNGLDKDPIEIDFTPPFRRIDMIEELEKMANLSIPKDLASEEANKYLLDACLKYDVKCPPPQTTTRLLDKLVGHFLEETCVNPSFIINHPEIMSPLAKWHRSRPGLTERFELFVNKHELCNAYTELNDPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGLGIDRLAMILTDSQNIKEVLLFPAMKPQDEPQAKAPAPALASASGY*

Click here to download the sequence:
Link to NCBI Protein BLAST