Transcript Information: R_Transcript_5454.p1


Annotated TAIR IDAT4G27120.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: DDRGK domain (InterPro:IPR019153); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:13602210-13604227 | Reverse length=298
E-Value2.7E-138
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 147.482364645721
Replicate 241.708867043187
Replicate 343.878784516954
Condition 2: 8 Hour
Replicate 139.210472922278
Replicate 247.819047991454
Replicate 350.836774338854
Condition 3: 24 Hour
Replicate 153.128709293842
Replicate 243.216385663969
Replicate 349.321280493786


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5454.p1 GENE.R_Transcript_5454~~R_Transcript_5454.p1 ORF type:complete len:296 (+),score=88.94,DDRGK|PF09756.5|4.7e+03,DDRGK|PF09756.5|9.7e-52 R_Transcript_5454:176-1063(+)
ATGGAGGATATTTTGCTGGCAATTCTTTCAATGGTTCTTGTATTTTCGTTAGTTCCTTTGTACTTGTGGAAACGTCGCCAGAACTCTAGAGCTGCTGATGGCCATCAAGAAGAAGAACCCCAGGCCCCTCAGAGGGCACATGTTGTTCGAGCTACTGGTGCTCGTCGTATGCGTAGGAGACCTGCTGCTGGTGCCAGTTCATCATCATCAGCTGCTGCTGCTGCTCAAGATATTGACGAGAGTGATGATGAAGCTGATGGGGTTGAGTATGAAGGGAGGGGATCAAGGAAAAAAGATAAGAAAAGACAAGAACGAGAAGCACAAAGGCAGGCTGAACAAGCAGCACGTGACACAAGGCTAGCGAAGCAAGATCGTTATGCGGAAATGCGAAGAAGAAAAGATGAGGAGCGGGAAGCAGAGGAGCGTCGGCTGGAGGAAGAAGCTAAGGCTCGGCAAGCAAAAGAGGAAGAAGCTGCTGCGTTAGAATTTGAAAAATGGAAAGGGGCATTCTCAGTTGATGCTGAAGGCACCACGGAGAATGAGGCTCAAGAGAACCAGGATCTACTCTCTGACTTCGTCGAATATATTAAGAAACACAAGTGTGTTCCTCTTGAAGACCTTGCGGCAGAGTTTAGGTTAAGGACTCAGGAATGCATTAATCGTATCACTTCCCTAGAAAGTATTGGGAGACTTTCAGGTGTCATGGACGACAGAGGAAAATACATATACATCTCCATGGAAGAAATGAAAGCTGTTGCTGACTACATCAAGCGCCAAGGCAGGGTTAGCATCTCCCATTTGGCGAGCAAATCGAACCAGTTCATTGACTTGGAGCCTAAAACGCAGATGGAAGAGGTTTCAATGGTAGACGAGATAGTAGCTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5454.p1 GENE.R_Transcript_5454~~R_Transcript_5454.p1 ORF type:complete len:296 (+),score=88.94,DDRGK|PF09756.5|4.7e+03,DDRGK|PF09756.5|9.7e-52 R_Transcript_5454:176-1063(+)
MEDILLAILSMVLVFSLVPLYLWKRRQNSRAADGHQEEEPQAPQRAHVVRATGARRMRRRPAAGASSSSSAAAAAQDIDESDDEADGVEYEGRGSRKKDKKRQEREAQRQAEQAARDTRLAKQDRYAEMRRRKDEEREAEERRLEEEAKARQAKEEEAAALEFEKWKGAFSVDAEGTTENEAQENQDLLSDFVEYIKKHKCVPLEDLAAEFRLRTQECINRITSLESIGRLSGVMDDRGKYIYISMEEMKAVADYIKRQGRVSISHLASKSNQFIDLEPKTQMEEVSMVDEIVAA*

Click here to download the sequence:
Link to NCBI Protein BLAST