Transcript Information: R_Transcript_54573.p1


Annotated TAIR IDAT5G53060.1
Annotated Gene NameRNA-binding KH domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21515355-21518197 | Forward length=652
E-Value2E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44089277668403
Replicate 20
Replicate 30.33198170429206
Condition 2: 8 Hour
Replicate 10.23657840528739
Replicate 20.54011791886922
Replicate 31.0522672823413
Condition 3: 24 Hour
Replicate 10.7763509690528
Replicate 20.21309428879785
Replicate 30.31721311140431


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54573.p1 GENE.R_Transcript_54573~~R_Transcript_54573.p1 ORF type:complete len:207 (+),score=42.85,KH_1|PF00013.25|0.0013,KH_1|PF00013.25|2.7e-11,KH_3|PF13014.2|0.017,KH_3|PF13014.2|2.7e-08 R_Transcript_54573:1-621(+)
ATGTCTGCTAAAAGTGGTGCCCAGATTCAAGTTCTTCCAAGAGACAATCTCCCTCAGTGTGCCTCCTCTGCTGACGAAGTTATCCAGATCAGTGGTGTAGCAGATGCCGTAAAGGAAGCAATCAAGTCTTTTTCAGATCAGATTATGGAAAATCCACCTTGTGATCATGATTCAGTTCCTTCGAATCCCTCTGGATCCTCATCTCATTCACACAGCCATCCTGTTCCAAGGCTCGAGTCCAACTCCTTCAGATCCTTGCCCCCTCAGCGGGCTTCTTTTAGTGGTGGATTTCGTGATAGTGGCGATTTTCATTCAAGTGTTCCTCCATTGTTTCCCAATTTCCGTGAGAACTTCAAACCTACTCGAATGGATGTTTCTGATGCCTTAACCTTTCGGTTAATTTGCCCTGATGAGAGGGTAGGTGGTGTCATTGGGAAAGGTGGGACTATAGTGAAGTCTCTCCAGCATGAAACAGGGTGTGAGATTAAAGTTCTTGAAGGCACTTCTGATGGAGAGGAACGTATAATAGCTGTGTCTGGCCCAGCGGTATTGTTGCTGATTTCACTGTTGACACTGCTGTTATGGTTTTTGATTATTTACTACTGCATTAAAAGATGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54573.p1 GENE.R_Transcript_54573~~R_Transcript_54573.p1 ORF type:complete len:207 (+),score=42.85,KH_1|PF00013.25|0.0013,KH_1|PF00013.25|2.7e-11,KH_3|PF13014.2|0.017,KH_3|PF13014.2|2.7e-08 R_Transcript_54573:1-621(+)
MSAKSGAQIQVLPRDNLPQCASSADEVIQISGVADAVKEAIKSFSDQIMENPPCDHDSVPSNPSGSSSHSHSHPVPRLESNSFRSLPPQRASFSGGFRDSGDFHSSVPPLFPNFRENFKPTRMDVSDALTFRLICPDERVGGVIGKGGTIVKSLQHETGCEIKVLEGTSDGEERIIAVSGPAVLLLISLLTLLLWFLIIYYCIKRC*

Click here to download the sequence:
Link to NCBI Protein BLAST