Transcript Information: R_Transcript_54582.p1


Annotated TAIR IDAT2G42760.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); Has 170 Blast hits to 164 proteins in 34 species: Archae - 0; Bacteria - 1; Metazoa - 26; Fungi - 10; Plants - 107; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:17796382-17797185 | Reverse length=267
E-Value1E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.634741917983
Replicate 215.852628426763
Replicate 315.54714318775
Condition 2: 8 Hour
Replicate 15.8018716140059
Replicate 28.3516546635753
Replicate 38.4561720159233
Condition 3: 24 Hour
Replicate 111.9860037735
Replicate 29.4775610493645
Replicate 310.636193843834


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54582.p1 GENE.R_Transcript_54582~~R_Transcript_54582.p1 ORF type:complete len:249 (+),score=73.73,DUF1685|PF07939.7|2e-05 R_Transcript_54582:259-1005(+)
ATGGAGGCTGAAACAGTGCTAAACCTTCTTGATTCATACTGGTATGATCTTGATTTCTTCAGCAGATCAAAATCGACCTTCAAAAACCCAGTTCAGGAAACCCCGTCTCTTCCAACAATACAAACAATTGAAAAACAGAGCTCAAGTTCTTTGATAAGTGACTCAGCTTCTCCAAACTCAGTTCTCATCTTTAATTCAAAGCTTCAAACCATCTTTTCTGGGAAAAATTCCAAAGATTTTGAAGATTCAAGACCAGAAAAAGAACCCCAATTAAAAACCCCCATCAAAGGCTCACCTATGAAGAGCAGGGTTAGTGCAATAAGAAGAAAACAGAGGAGTTTGAGTAAGAGTTTGTCAGACCTTGAGTTTGAAGAGCTTAAGGGGTTTATGGATTTGGGGTTTGTGTTCTCTGAAGATGATAAAGATTCCAGCTTGGCTTCTATTATTCCTGGGTTACACAGATTAGGCAAGAAATCTCAAGCTAATGATGATGATGGTGATGATAATGAAAATCTTGGTGTTGTTGATGATGAAAGTGAGGATAAAAACAGTGAGAAAGGTGAAAATTTGGTGAATAGAAGTGAAGTTTCAAGGCCTTATCTCTCTGAAGCATGGCAAGTGAAGGAAAAGAAGAAAAGAGAGAATTCTTTGTTCAATGGAAGAAGAGTTCCTGCTTTCAATAGTGAGATTGATATGAAGGATTATCTCAGACTTTGGGCTCATTCTGTAGCTTCAACTGTTAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54582.p1 GENE.R_Transcript_54582~~R_Transcript_54582.p1 ORF type:complete len:249 (+),score=73.73,DUF1685|PF07939.7|2e-05 R_Transcript_54582:259-1005(+)
MEAETVLNLLDSYWYDLDFFSRSKSTFKNPVQETPSLPTIQTIEKQSSSSLISDSASPNSVLIFNSKLQTIFSGKNSKDFEDSRPEKEPQLKTPIKGSPMKSRVSAIRRKQRSLSKSLSDLEFEELKGFMDLGFVFSEDDKDSSLASIIPGLHRLGKKSQANDDDGDDNENLGVVDDESEDKNSEKGENLVNRSEVSRPYLSEAWQVKEKKKRENSLFNGRRVPAFNSEIDMKDYLRLWAHSVASTVK*

Click here to download the sequence:
Link to NCBI Protein BLAST