Transcript Information: R_Transcript_54588.p1


Annotated TAIR IDAT5G38220.1
Annotated Gene Namealpha/beta-Hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15269012-15271140 | Forward length=336
E-Value8.7E-182
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.230335551628
Replicate 28.2282798928736
Replicate 312.443930423856
Condition 2: 8 Hour
Replicate 112.706178567219
Replicate 214.081312078368
Replicate 317.955376992059
Condition 3: 24 Hour
Replicate 114.271069357762
Replicate 213.054328910909
Replicate 314.374897943016


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54588.p1 GENE.R_Transcript_54588~~R_Transcript_54588.p1 ORF type:complete len:370 (+),score=74.10,Abhydrolase_5|PF12695.3|1.3e-27,Hydrolase_4|PF12146.4|3.9e-10,Hydrolase_4|PF12146.4|0.00063,Hydrolase_4|PF12146.4|8.4e+02,Abhydrolase_1|PF00561.16|3.1e-07,Abhydrolase_1|PF00561.16|0.00066,Abhydrolase_1|PF00561.16|4.4e+02,Peptidase_S9|PF00326.17|0.0003,DLH|PF01738.14|1.2e-05,FSH1|PF03959.9|1.7e-05,FSH1|PF03959.9|5.9e+03 R_Transcript_54588:495-1604(+)
ATGGGAGGAGTTACGTCATCAATTGCTGCTAAATTTGCATTCTTTCCACCAACTCCACCATCTTACACAGTTGTACCTGAAGAGAATTTAGGAAGTGAAGAAGGTAAATTGGTGATACCTGAGGTTCCAAGAAGGAACGAGGTTGATGTTTTGAAGCTCAAAACTCGTAGAGGAAATGATGTTATTGCTGTTTATGTTAAGCACCCTAAAGCTTCAGCTACTTTGCTCTATTCTCATGGCAATGCTGCTGATTTAGGTCAAATGTTTGAGCTCTTTGTTGAGCTTAGCAATCGCCTTCGTGTTAATCTTTTGGGGTATGATTACTCCGGATATGGTCAGTCAACTGGAAAGCCTACTGAATCTAATACATACGCAGACATTGATGCAGCATATCAATGCCTCAAGGAGCAGTATGGAGTCAAAGATGAGCAATTGATATTGTATGGTCAGTCTGTTGGGAGTGGTCCTACGTGTGATCTCGCGTCACGCACCCCTAACTTAAGAGGTGTGGTTTTGCACAGCCCTATCCTGTCTGGAGTAAGGGTTCTTTATCCTGTCAAAAGGACATATTGGTTTGATATTTACAAGAATGTTGACAAAATCGGCCAGGTGAAATGTCCTGTCTTAGTGATCCATGGGACTGCAGATGAAGTTGTTGATTGGTCCCATGGAAAACAACTCTATGAGCTGTGCAAGGAAAAGTATGAACCTTTGTGGCTTAGTGGTGGCGGACATTGCAATCTCGAGCTTTTCCCTGATTACATCAGGCATTTGAAGAAGTTTGTGTCATTTCTCAACAAATCAAAAGCAGGCGCAAACACAACAAAAAATCCCACACCGGTAGAGTCATCAAATGAATCTTCCAAAGAGTCCACAGTAGAATCTGACAATCAAAGCAAGACACCCTCCACTGCAAATGACAGTCAAATCAAGACACCATCAACTGCAAATTCAGACACATTTGAATTAAATCCTGACATCCCTGAAGTATCTAGAAACAGCTTAGACAGTCGGCTTGAAAAATCCAAGAAAACAAGCAAGCCTGAAAAATCACGTATGAGCACTGACCAGGTTGACAGATATAGGAGAAAAAAGGGCTTATTATGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54588.p1 GENE.R_Transcript_54588~~R_Transcript_54588.p1 ORF type:complete len:370 (+),score=74.10,Abhydrolase_5|PF12695.3|1.3e-27,Hydrolase_4|PF12146.4|3.9e-10,Hydrolase_4|PF12146.4|0.00063,Hydrolase_4|PF12146.4|8.4e+02,Abhydrolase_1|PF00561.16|3.1e-07,Abhydrolase_1|PF00561.16|0.00066,Abhydrolase_1|PF00561.16|4.4e+02,Peptidase_S9|PF00326.17|0.0003,DLH|PF01738.14|1.2e-05,FSH1|PF03959.9|1.7e-05,FSH1|PF03959.9|5.9e+03 R_Transcript_54588:495-1604(+)
MGGVTSSIAAKFAFFPPTPPSYTVVPEENLGSEEGKLVIPEVPRRNEVDVLKLKTRRGNDVIAVYVKHPKASATLLYSHGNAADLGQMFELFVELSNRLRVNLLGYDYSGYGQSTGKPTESNTYADIDAAYQCLKEQYGVKDEQLILYGQSVGSGPTCDLASRTPNLRGVVLHSPILSGVRVLYPVKRTYWFDIYKNVDKIGQVKCPVLVIHGTADEVVDWSHGKQLYELCKEKYEPLWLSGGGHCNLELFPDYIRHLKKFVSFLNKSKAGANTTKNPTPVESSNESSKESTVESDNQSKTPSTANDSQIKTPSTANSDTFELNPDIPEVSRNSLDSRLEKSKKTSKPEKSRMSTDQVDRYRRKKGLLW*

Click here to download the sequence:
Link to NCBI Protein BLAST