Transcript Information: R_Transcript_54615.p1


Annotated TAIR IDAT3G58600.1
Annotated Gene NameAdaptin ear-binding coat-associated protein 1 NECAP-1
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21668746-21670999 | Reverse length=302
E-Value1.1E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.646731969107
Replicate 247.7520026829
Replicate 345.336251492385
Condition 2: 8 Hour
Replicate 143.785487666081
Replicate 246.740454404145
Replicate 349.916929206064
Condition 3: 24 Hour
Replicate 141.371881774925
Replicate 240.664383579502
Replicate 339.367468846572


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54615.p1 GENE.R_Transcript_54615~~R_Transcript_54615.p1 ORF type:complete len:288 (+),score=80.28,DUF1681|PF07933.10|7.3e-50 R_Transcript_54615:208-1071(+)
ATGGACATTGAGAAAAACCCATCAAATGGTAAAGAAGGCTTGGACGAAACAGAAGACACTGACCCAATCGAGCTTGTCCTCTTTCAAGTCTCTGAATGCTATGTTTACATGATTCCCCCAAGGAAAACGGCTGCATCCTACAGGGCCGATGAATGGGATGTAAATAAATGGGCTTGGGAAGGAGTTTTGAAGGTTATTAGCAAGGGTGAGGAGTGTATTATCAGACTTGAGGATAAATCAACAGGTGAATTATATGCTCGGGCCTTTTTGAGGAAAGGAGAGCCTCATCCTGTGGAACCGGTAATTGATAGCAGCAGATACTTCGTTCTTCGAGTAGAGGAGAAAATAGGTGGTCGCCTTCGACATGCTTTCATTGGGATAGGATTCCGAGAGAGACCCCAAGCTTATGACTTTCAAGCTGCTCTGCATGATCATATGAAGTATCTGGACAAGAAGAAAACTGCTGAAGAAATGGAGCAGCAATTCCAGAAAACTTCAACTGTTGACTACAGTTTGAAGGATGGGGAGACCCTAGTTCTTCATTTGAAAAATAAAGCTGGGGGGAATGTGAAGCCGAAGTCCATTGAACAGGGTGTGAACAACCTCTCGCTCGCAGATAAGAGTAAACCAAAGGATCCTGTGCTTTCTATCAAACCACCACCTCCTCCTCCAGCAACCCTCTCACCACGCGCTGATTCTCCAAGAACTCCATCATTGTTTAATTCCAGTCCTGAAAAAAATGTGAAAGAAGAAAAAGAAGACACCAAGGAAGAGCAGCCTGAACCTGACTCATGTTTGACGGAAAACCAAAGTTCAGAAGATATACCAGACGATGACTTTGGGGATTTTCAGGCAGCTGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54615.p1 GENE.R_Transcript_54615~~R_Transcript_54615.p1 ORF type:complete len:288 (+),score=80.28,DUF1681|PF07933.10|7.3e-50 R_Transcript_54615:208-1071(+)
MDIEKNPSNGKEGLDETEDTDPIELVLFQVSECYVYMIPPRKTAASYRADEWDVNKWAWEGVLKVISKGEECIIRLEDKSTGELYARAFLRKGEPHPVEPVIDSSRYFVLRVEEKIGGRLRHAFIGIGFRERPQAYDFQAALHDHMKYLDKKKTAEEMEQQFQKTSTVDYSLKDGETLVLHLKNKAGGNVKPKSIEQGVNNLSLADKSKPKDPVLSIKPPPPPPATLSPRADSPRTPSLFNSSPEKNVKEEKEDTKEEQPEPDSCLTENQSSEDIPDDDFGDFQAAG*

Click here to download the sequence:
Link to NCBI Protein BLAST