Transcript Information: R_Transcript_54616.p1


Annotated TAIR IDAT3G58600.1
Annotated Gene NameAdaptin ear-binding coat-associated protein 1 NECAP-1
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21668746-21670999 | Reverse length=302
E-Value1.2E-84
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.13484923447
Replicate 21.8417807382718
Replicate 31.4735328278227
Condition 2: 8 Hour
Replicate 11.1455375413916
Replicate 20.65382695442063
Replicate 31.592246545648
Condition 3: 24 Hour
Replicate 10.93979327832707
Replicate 20.38693436650136
Replicate 31.6639775492963


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54616.p1 GENE.R_Transcript_54616~~R_Transcript_54616.p1 ORF type:complete len:171 (+),score=32.21,DUF1681|PF07933.10|4.7e-44 R_Transcript_54616:208-720(+)
ATGGACATTGAGAAAAACCCATCAAATGGTAAAGAAGGCTTGGACGAAACAGAAGACACTGACCCAATCGAGCTTGTCCTCTTTCAAGTCTCTGAATGCTATGTTTACATGATTCCCCCAAGGAAAACGGCTGCATCCTACAGGGCCGATGAATGGGATGTAAATAAATGGGCTTGGGAAGGAGTTTTGAAGGTTATTAGCAAGGGTGAGGAGTGTATTATCAGACTTGAGGATAAATCAACAGGTGAATTATATGCTCGGGCCTTTTTGAGGAAAGGAGAGCCTCATCCTGTGGAACCGGTAATTGATAGCAGCAGATACTTCGTTCTTCGAGTAGAGGAGAAAATAGGTGGTCGCCTTCGACATGCTTTCATTGGGATAGGATTCCGAGAGAGACCCCAAGCTTATGACTTTCAAGCTGCTCTGCATGATCATATGAAGTATCTTCTTCGTCATTTATCTGCAAATCGAACTTTTGTGTCTAACTCAGCACATCTTTCCCTGCTTTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54616.p1 GENE.R_Transcript_54616~~R_Transcript_54616.p1 ORF type:complete len:171 (+),score=32.21,DUF1681|PF07933.10|4.7e-44 R_Transcript_54616:208-720(+)
MDIEKNPSNGKEGLDETEDTDPIELVLFQVSECYVYMIPPRKTAASYRADEWDVNKWAWEGVLKVISKGEECIIRLEDKSTGELYARAFLRKGEPHPVEPVIDSSRYFVLRVEEKIGGRLRHAFIGIGFRERPQAYDFQAALHDHMKYLLRHLSANRTFVSNSAHLSLLS*

Click here to download the sequence:
Link to NCBI Protein BLAST