Transcript Information: R_Transcript_54623.p1


Annotated TAIR IDAT5G07950.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2540530-2542047 | Reverse length=303
E-Value3E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14372410200566
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.17606993575737
Replicate 30.14292606787706
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.17234413139289


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54623.p1 GENE.R_Transcript_54623~~R_Transcript_54623.p1 ORF type:internal len:127 (+),score=27.79 R_Transcript_54623:2-379(+)
TGTCTTCCTACAAGGCTATGGTACGTTTTTGGGCATCTCATTCGTCAAATAAACTTATTTGTTGGAAACAGAGCTTTTCTGGTAAATGAAACCACTAATGATGTTATGTGGCAAAGAACAAGAGTGATGGTTGGAGAGTTTTGGTGTGGAATACAGGTGGCTGTTGTTGTTGACATGATGAATTCGAGCAGATCTATGAGGTGTTTCTTGAAAGCAACTAGCGGGAGCCCCCTTGTACAATTTTCTAGCAGCTCAGATGATAGTAATGACACTGGTGATGGCGGAGGGATTCCAGTCTTCACATTCTTGTCTGTCTCTGCATTTGAGATGTTGGCTGAGGAGCTTGTGGAAATGTTCAAAAAGGAGCTTGCTTTGAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54623.p1 GENE.R_Transcript_54623~~R_Transcript_54623.p1 ORF type:internal len:127 (+),score=27.79 R_Transcript_54623:2-379(+)
CLPTRLWYVFGHLIRQINLFVGNRAFLVNETTNDVMWQRTRVMVGEFWCGIQVAVVVDMMNSSRSMRCFLKATSGSPLVQFSSSSDDSNDTGDGGGIPVFTFLSVSAFEMLAEELVEMFKKELALK

Click here to download the sequence:
Link to NCBI Protein BLAST