Transcript Information: R_Transcript_54624.p1


Annotated TAIR IDAT5G07950.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2540530-2542047 | Reverse length=303
E-Value7.1E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.69535089351309
Replicate 21.199788595217
Replicate 30.65447821703293
Condition 2: 8 Hour
Replicate 11.1659935689164
Replicate 21.7036862355189
Replicate 31.0372348925935
Condition 3: 24 Hour
Replicate 11.5305204818469
Replicate 21.260300508033
Replicate 30.62536299105421


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54624.p1 GENE.R_Transcript_54624~~R_Transcript_54624.p1 ORF type:5prime_partial len:105 (+),score=25.73 R_Transcript_54624:2-316(+)
GTGGCTGTTGTTGTTGACATGATGAATTCGAGCAGATCTATGAGGTGTTTCTTGAAAGCAACTAGCGGGAGCCCCCTTGTACAATTTTCTAGCAGCTCAGATGATAGTAATGACACTGGTGATGGCGGAGGGATTCCAGTCTTCACATTCTTGTCTGTCTCTGCATTTGAGATGTTGGCTGAGGAGCTTGTGGAAATGTTCAAAAAGGAGCTTGCTTTGAAGTTGAGCTTCTCTCGGTCAGTTGTCAAAAACTTGAACAACATAATACCCTGTCTTGGGCAGACGAGCTTTATAGTGGAGAAAGTGATCAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54624.p1 GENE.R_Transcript_54624~~R_Transcript_54624.p1 ORF type:5prime_partial len:105 (+),score=25.73 R_Transcript_54624:2-316(+)
VAVVVDMMNSSRSMRCFLKATSGSPLVQFSSSSDDSNDTGDGGGIPVFTFLSVSAFEMLAEELVEMFKKELALKLSFSRSVVKNLNNIIPCLGQTSFIVEKVIS*

Click here to download the sequence:
Link to NCBI Protein BLAST