Transcript Information: R_Transcript_54629.p1


Annotated TAIR IDAT5G07950.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2540530-2542047 | Reverse length=303
E-Value2.8E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3207011689868
Replicate 23.4002105937325
Replicate 36.3063083260663
Condition 2: 8 Hour
Replicate 15.5514511621285
Replicate 26.8802713357494
Replicate 39.0390611591401
Condition 3: 24 Hour
Replicate 19.1087656207085
Replicate 24.8217974902477
Replicate 37.5322060663412


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54629.p1 GENE.R_Transcript_54629~~R_Transcript_54629.p1 ORF type:3prime_partial len:247 (+),score=51.66 R_Transcript_54629:157-894(+)
ATGTCTTTGTGCTGTCGCTGTAACGCTGGCGCCGGCGCCTCTCTATCTCTCTCACCAAGTTCACAGGCGCGGCTGTACAAAAACGCTCATCGGCTCCACAATTCGCAAACCCTAATTCAAGTGATGATGACAACGATCGACAGAAATGAATCGGTGGCATCACCTTTTCTCCCCTCCTCTAGGCTTCAAGCACCATCATCATTATCAGGAAGCAGCTTGAGAACTACAGAGTCGCCTTCTTCAATGTTGAGACAATGGAGGCCACAAGCTCAGAGGAACCTTAGAAATCAGTGGTCAAAGTTATCTTCCCTTAGGCATGATTGGGTTTCTAATTCTTCTGCTAGCCGATCCCATGCCACTTCTCTGGTCAACTCTTACCTCTCTCACAGTTATATGGATGCTATGGATTTGGGTGTTTTGAGTGATATGCCCAATATTCGGAAAAAGGCTTGCTCTAAATTGCTGAAGCAGCTGGAGCTTCAAGGCAGCCAACTTTTGTCTTCCTACAAGGCTATGGTGGCTGTTGTTGTTGACATGATGAATTCGAGCAGATCTATGAGGTGTTTCTTGAAAGCAACTAGCGGGAGCCCCCTTGTACAATTTTCTAGCAGCTCAGATGATAGTAATGACACTGGTGATGGCGGAGGGATTCCAGTCTTCACATTCTTGTCTGTCTCTGCATTTGAGATGTTGGCTGAGGAGCTTGTGGAAATGTTCAAAAAGGAGCTTGCTTTGAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54629.p1 GENE.R_Transcript_54629~~R_Transcript_54629.p1 ORF type:3prime_partial len:247 (+),score=51.66 R_Transcript_54629:157-894(+)
MSLCCRCNAGAGASLSLSPSSQARLYKNAHRLHNSQTLIQVMMTTIDRNESVASPFLPSSRLQAPSSLSGSSLRTTESPSSMLRQWRPQAQRNLRNQWSKLSSLRHDWVSNSSASRSHATSLVNSYLSHSYMDAMDLGVLSDMPNIRKKACSKLLKQLELQGSQLLSSYKAMVAVVVDMMNSSRSMRCFLKATSGSPLVQFSSSSDDSNDTGDGGGIPVFTFLSVSAFEMLAEELVEMFKKELALK

Click here to download the sequence:
Link to NCBI Protein BLAST