Transcript Information: R_Transcript_54630.p1


Annotated TAIR IDAT5G07950.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2540530-2542047 | Reverse length=303
E-Value3.6E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.95444739983968
Condition 2: 8 Hour
Replicate 10.25506109320047
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.22974228011018
Replicate 30.68399077146554


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54630.p1 GENE.R_Transcript_54630~~R_Transcript_54630.p1 ORF type:5prime_partial len:96 (+),score=22.51 R_Transcript_54630:2-289(+)
GTGGCTGTTGTTGTTGACATGATGAATTCGAGCAGATCTATGAGGTGTTTCTTGAAAGCAACTAGCGGGAGCCCCCTTGTACAATTTTCTAGCAGCTCAGATGATAGTAATGACACTGGTGATGGCGGAGGGATTCCAGTCTTCACATTCTTGTCTGTCTCTGCATTTGAGATGTTGGCTGAGGAGCTTGTGGAAATGTTCAAAAAGGAGCTTGCTTTGAAGGTAATATGCAGTTTCTATAGGATGGATTTGGTTTATGAAACCATCATTTTTCAACTTTGCTCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54630.p1 GENE.R_Transcript_54630~~R_Transcript_54630.p1 ORF type:5prime_partial len:96 (+),score=22.51 R_Transcript_54630:2-289(+)
VAVVVDMMNSSRSMRCFLKATSGSPLVQFSSSSDDSNDTGDGGGIPVFTFLSVSAFEMLAEELVEMFKKELALKVICSFYRMDLVYETIIFQLCS*

Click here to download the sequence:
Link to NCBI Protein BLAST