Transcript Information: R_Transcript_54640.p1


Annotated TAIR IDAT1G57790.1
Annotated Gene NameF-box family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:21404578-21405636 | Reverse length=352
E-Value3.1E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.668338435245
Replicate 25.4022311415939
Replicate 39.2963683082528
Condition 2: 8 Hour
Replicate 17.1444168281087
Replicate 27.3547728071804
Replicate 311.844287036115
Condition 3: 24 Hour
Replicate 110.717703108955
Replicate 27.3712536345165
Replicate 311.379284134302


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54640.p1 GENE.R_Transcript_54640~~R_Transcript_54640.p1 ORF type:complete len:377 (+),score=35.12,F-box-like|PF12937.3|4.5e-09,F-box-like|PF12937.3|6.6e+03,F-box-like|PF12937.3|1.9e+03,F-box|PF00646.29|4e-08,F-box|PF00646.29|6.8e+03 R_Transcript_54640:464-1594(+)
ATGCCAGGAAATAAGAGAAGAAAGCTCAAATCGTTGTCTGCTGCTATAAGGGATGATAAAAGGGCTCCTGTTGAGGCGAGGCAAAACACACAAGGGTTCTCGTCTTGGTCTGATCTTCCTGCAGAACTCTTGGAATTGATAATCTCCCATTTGTCGCTTAGGGAGAATATCCGTGTTTCTGCTGTTTGCAAGCGATGGCACTCGATTGCTGTTTCTGTGCGCCTTGTTAACAAGCCTCCGTGGATTATGTATTTTCCAAAATTTGGCGATTTGTATGAATTTTATGACCCGCTTAGCCGCAAGACCTATTCTATTGAATTACCAGAGTTGTGTGATTCCAGGGTTTGTTACACAAAAGGTGGTTGGCTACTCTTATATAGAGCTAGAAATTACCGTCTTTTCTTCTTTAATCCCTTCTCCCGGGAGTTAATTAAGTTGCCTAGATTTGAAATCACTTGCCAAATTGTCGCTTTCTCTTGTGACCCAACATCTCCAAGCTGTGTAGTTTTCACGGTGAAGCATGTTAGCCCAACTGTTGTCGCTATTAGCACCTGCCATCCAGGGGCAACAGAATGGACTACTGCCAATTATCAAAATCGCCTGCCTTTTGTTAGTAGTATCTGGAACAAGTTGGTTTTCTCAAATGGGCAATTTTATTGTCTTAGTCTTACTGGTTGGCTTGGGGTTTTTGATCCGAAAAGGCTTACTTGGAATGTGCTGGTAGTTCCTCCACCTAGATGCCCAGAGAACTTTTTCACCAAAAACTGGTGGAAAGGCAAGTTTTTGGCAGAACATGATGGAGACATTCTGGTAATATACACTTGCTGTAGTGATTACCCCATCATATTTAAGCTTGATCAGGCGAACATGGTATGGGAAGAAGTGAAGACCTTAGATGGGATTACTCTCTTTGCAAGTTTTCTGTCATCCCACTCCAGAACTGATCTCCCCGGAATAATGAGGAACAGTGTTTATTTCTCTAAGGTCCGTTTCTATGGGAAACGATGTATATCATACTCTCTCAAGGACTGTAGATACTATCCTCGCAAGCAATTCCATGACTGGGGAGAGCAGGATCCTTTTGAGAGCATTTGGATCGATCCGCCCCAGGATCTCTCAATCTTCGCGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54640.p1 GENE.R_Transcript_54640~~R_Transcript_54640.p1 ORF type:complete len:377 (+),score=35.12,F-box-like|PF12937.3|4.5e-09,F-box-like|PF12937.3|6.6e+03,F-box-like|PF12937.3|1.9e+03,F-box|PF00646.29|4e-08,F-box|PF00646.29|6.8e+03 R_Transcript_54640:464-1594(+)
MPGNKRRKLKSLSAAIRDDKRAPVEARQNTQGFSSWSDLPAELLELIISHLSLRENIRVSAVCKRWHSIAVSVRLVNKPPWIMYFPKFGDLYEFYDPLSRKTYSIELPELCDSRVCYTKGGWLLLYRARNYRLFFFNPFSRELIKLPRFEITCQIVAFSCDPTSPSCVVFTVKHVSPTVVAISTCHPGATEWTTANYQNRLPFVSSIWNKLVFSNGQFYCLSLTGWLGVFDPKRLTWNVLVVPPPRCPENFFTKNWWKGKFLAEHDGDILVIYTCCSDYPIIFKLDQANMVWEEVKTLDGITLFASFLSSHSRTDLPGIMRNSVYFSKVRFYGKRCISYSLKDCRYYPRKQFHDWGEQDPFESIWIDPPQDLSIFA*

Click here to download the sequence:
Link to NCBI Protein BLAST