Transcript Information: R_Transcript_54650.p1


Annotated TAIR IDAT3G07810.2
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2492875-2495102 | Forward length=495
E-Value9.7E-181
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 149.098154466807
Replicate 247.839671834603
Replicate 347.891512569171
Condition 2: 8 Hour
Replicate 139.001746909642
Replicate 244.816113394781
Replicate 350.089254623346
Condition 3: 24 Hour
Replicate 149.693481467562
Replicate 254.952026898253
Replicate 349.8245429476


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54650.p1 GENE.R_Transcript_54650~~R_Transcript_54650.p1 ORF type:complete len:474 (+),score=106.19,RRM_1|PF00076.18|3.3e-15,RRM_1|PF00076.18|1.6e-15,RRM_6|PF14259.2|3.2e-12,RRM_6|PF14259.2|1.2e-13,RRM_7|PF16367.1|0.00015,RRM_7|PF16367.1|3.6e-06,RRM_5|PF13893.2|6.5,RRM_5|PF13893.2|0.0015 R_Transcript_54650:55-1476(+)
ATGGAATCGGATCGTGGAAAGCTTTTCATTGGCGGGATCTCATGGGACACAGATGAGAATAGGCTCAAAGAGTACTTTGGACAATATGGTGAAGTAGTGGAAGCTGTGATCATGAGAGATCGTCTCACAGGTCGTGCTCGTGGCTTTGGTTTCATTGTCTTTGTGGATCCTGCTGTCGCGGAGAGAGTTGTTATGGACAAGCATATGATTGATGGCCGCACAGTTGAAGCTAAGAAAGCTGTTCCAAGGGACGATCAGCAGATTCTCAGTAGAAACAATAATAGCATCCAAGGATCTCCGGGTCCTGGACGCACCAAAAAAATTTTTGTAGGAGGTTTAGCTTCAACAGTTACAGAAAGCGACTTCAAGAAGTACTTCGATCAGTTTGGTACCATTACTGATGTTGTGGTGATGTATGATCATAACACCCAAAGGCCTAGAGGGTTTGGGTTCATTACTTATGATTCCGAGGATGCCGTGGATAGGGTGTTGCACAAAACTTTCCATGAACTTAATGGAAAAATGGTTGAGGTCAAGAGGGCAGTCCCAAAAGAGCTCTCCCCAGGCCCTAGTCGTAGCCCCCTAATAGGATATAATTATGGCTTGGGAAGGACTGGCAACTTTGTAAACAATTATGCTCAAGGGTACAATCTCAGCTCTATTGGAGGATATGGTAGATTTAATCCGCTTGTTACTAGCAGAACTGGGCTTCCTCCATTTGGCAATCCTGGATATGGGATGGCTATGAATATGGAGCTGGGATTGGGTGCTGGCTATGGCGCAAACTCTAGTCTCAGTAACAGCCATGGTTATGGCCGCGTTTTAGGACCTTATTATAGCGGAAATTCAAACAGGTACAGCACTCCTATTGGATACAATGGAGCTAGTGGAAGAGGTGATTCTTTGGTTAGCTCAGCAGGTAGGAATGTTTGGGGTAATGGGTCTTTTAGCAATCCCACAAATCCCAGCAGCCCTGGTGCTTTCTTGGGCTCTGGGAGTGGAAACTTTGGAGTCTCATTTGGAAATAGTGGATCCAACTGGGGTGCATCTCCTGCCTCGACCCAAGGTGGCAATAATACTTCTGGATATGGCACTGGGAATCTTGGGTATGGTTTTGGTGATGGAAATTATGGATTAGGGGGCGGGGTTTATGGAAGAACCCATGCTGCCGATGGGGCTCCAGCATCATCTTTTCCTGCATCAACTGGTGGTTTTGACACATCATATGGTGATCTTTACAGTGGCGGCTCAACTTATGGTAGTTCAACATGGCGTTCTGGTTCTCCTGAGCTAGATGGCTCTGGTTCATTTGGTTTTGGTCTTGGCAATACAGCTGCAGATGTTGCTTCTAAATCTTCTGAAGGTTTTGTTGGAGGTTATAGTGCTACAAATAGACAAGCAAATAGAGGAATTGCCGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54650.p1 GENE.R_Transcript_54650~~R_Transcript_54650.p1 ORF type:complete len:474 (+),score=106.19,RRM_1|PF00076.18|3.3e-15,RRM_1|PF00076.18|1.6e-15,RRM_6|PF14259.2|3.2e-12,RRM_6|PF14259.2|1.2e-13,RRM_7|PF16367.1|0.00015,RRM_7|PF16367.1|3.6e-06,RRM_5|PF13893.2|6.5,RRM_5|PF13893.2|0.0015 R_Transcript_54650:55-1476(+)
MESDRGKLFIGGISWDTDENRLKEYFGQYGEVVEAVIMRDRLTGRARGFGFIVFVDPAVAERVVMDKHMIDGRTVEAKKAVPRDDQQILSRNNNSIQGSPGPGRTKKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLHKTFHELNGKMVEVKRAVPKELSPGPSRSPLIGYNYGLGRTGNFVNNYAQGYNLSSIGGYGRFNPLVTSRTGLPPFGNPGYGMAMNMELGLGAGYGANSSLSNSHGYGRVLGPYYSGNSNRYSTPIGYNGASGRGDSLVSSAGRNVWGNGSFSNPTNPSSPGAFLGSGSGNFGVSFGNSGSNWGASPASTQGGNNTSGYGTGNLGYGFGDGNYGLGGGVYGRTHAADGAPASSFPASTGGFDTSYGDLYSGGSTYGSSTWRSGSPELDGSGSFGFGLGNTAADVASKSSEGFVGGYSATNRQANRGIAA*

Click here to download the sequence:
Link to NCBI Protein BLAST