Transcript Information: R_Transcript_54661.p1


Annotated TAIR IDAT5G40480.1
Annotated Gene Nameembryo defective 3012
Annotated Gene Symbol(s)EMB3012
Annotation TypeOrtholog
Chromosome Positionchr5:16213361-16223982 | Forward length=1923
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.1692178110522
Replicate 23.8303328408027
Replicate 35.1732528834722
Condition 2: 8 Hour
Replicate 14.5808181451694
Replicate 24.6339605262612
Replicate 35.9473494229072
Condition 3: 24 Hour
Replicate 16.8932744182409
Replicate 25.3456932401451
Replicate 35.7462294475162


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54661.p1 GENE.R_Transcript_54661~~R_Transcript_54661.p1 ORF type:complete len:1935 (+),score=384.93,Big_2|PF02368.14|1.6e+04,Big_2|PF02368.14|0.15,Big_2|PF02368.14|0.00017,Big_2|PF02368.14|2.1e-06,Big_2|PF02368.14|0.87 R_Transcript_54661:162-5966(+)
ATGTTCCGCTCTACTCTTTCCATCGCTTTCGCTGCTTTAATTTTCGTCTCAGCTAATGATTTCACGGCAACATCGATTTCTGGGCCCCACATTGCTGATGTCAACCTTCTCTTACCTCCCAAAATGACTCATCCTGTTGAGTATCGCCTTCAAGGCAGTGGTGGATGCTTCAAATGGTCATGGGATCATCATGATGTCTTATCTGTTTTACCCGAGTATAACGAAAGCAGCCACTGTTCCACTAGTGCTCGGCTGAGATCAATCGCTCCTTACACTGGACGAAAAGAGACTGCTGTTTATGCAACCGACATTCGCACAGGAGTTGTTATTCGCTGCAAGGTGTATATTGATATATTTTCCAGGATCCAAATATTTCACAACTCTGTTAAACTCGACTTAGATGGCCTTGCAACTCTCCGGGTTCGTGCCTTTGACAGTGAAGAAAATGTGTTCTCATCATTAGTGGGCTTACAATTCCTGTGGCAACTGATGCCTGAAAGTGATGGGTCACCTCATCATCTTGTTCATGTCCCTTTAAGGGATTCTCCTTTGAGTGACTGTGGTGGATTTTGTGGGGATCTGGATGTACAAATAAAGCTTGAAGATAGTGGTGCGTTTTCTGACCTTTTTGTAGTTAAAGGAGCTGGAATCGGGCATGAGGCTGTCTCCGTACATTTGTTTGAACCACAGTTTGACAAAATGGCAGATGATATTATTTTAACTGTAGCAGAAGCCATGTCGCTGGAACCACCTTCCCCAGTTCTTGTTCTAGTTGGTGCATTGGTGCAGTATAGTCTTAAAGTTATCCGTGGAAATATCCCTCAAGTGGTGCCTTTGCCATCTCCATTTCACCGTTGGTCTGCATTAAATGCATCTGTTGCTCAGGTGGATGCTATGGTCGGTTCAGTCCAGGCATTAAACCTAGGGGAAACAAGTATCATAGTTGAGGATACCAGAGTTGCTGGGCACGTGCAAATATCTTCTCTGAATGTTGTCCTGCCAGAATATATATCTTTATACTTGTTGCCTTTGTCTAAATCTGGCTATCCTGTTGAGGGAATAGAGCCTATGCTGTCTGCTACATGTTGGTATGTTGTCTCTGGCCGGCGGTATCTCATTGAATTAAAGGTTTTCTCCCGGGGCCCTAATGTTCAAGAAATATATATCACAGAGAATGAAGATGTGAAATTATACTTCGATCAGCCAAAGCACTGGATGAATTTCCCTGTTCTGGATAGTACTACATTGAAGAATGGTAGGCAAAATTCAAGAATAATTGATGCAACCTTCCAAGGACTTGGAAAGTTGTCAGCGTCTTTAGCATATATTACTGGGCATGCTGAAGCAAAAGAGGTGCTGAAAGTTGTGCAAGAAGTTATGGTTTGCGACCAAGTAATGGTTGTAGAAGAAGCAAGGGGTGCTTCATTGTCAGCCATTCTGCTCCCCTGGTCTCCAGATGTTTATCAGGAGGCAGAGCTCAAAGCTGTAGGAGGTTGCGCAAAATCACCAGCTGACTATAGGTGGCTTTCTTCTGATAGCAGTATTTTATCTGTATCTGCTATGGGTGTTGTGCAAGCTAAAAGGCCTGGGAAAGCTACTGTTAAAGTAATTTCAGTTTATGATAGTCTAAATTATGATGAGGTGGTCATTGAAGTTGCTGTCCCATCTTTCATGTTAATGTTGCCAAACTTTCCGGTAGAGACTGTCGTAGGATCACATCTTCAAGCTGCTGTTACTATGAAAGCAGCAAATGGTGATTATTTTTATCAGTGTGATGCTTTTAGTTCTCTTGTAAAATGGTCTACTGGAAGTGAGTATTTCTTAATTGTCGACTCTACAAGGGATGCATTTTACAAGAATGAAACCAAGAAATTCGACCAAGCAAAATCTGATTATGGTCCTATTTGTGCGTGGAGCTACATTTATGCTGCTAGTCCTGGTCGAGCTATTTTGCAGGCAACATTTTCCAAAAATTTGGATCATAGTTTTGGCAGGCAGATAATGTTGAAAGCATCTTCCACCATTGCGTCCTTCTTCCCTCTAATTGTACGTCAAGCTGGAGATGGGAATCAATTTGGTGGTTACTGGTTCAACTTGGAGAAAGCGGAAAGTCATGATGAAGTAGAAAATTTGGATGATTTTTATCTTGTTCCTGGAACCCTTTTAGATGTCATGCTTCTCAGAGGACCTGACAAATGGGGTGAAGGTGTCGATTATATCCAAACTGTACATATTTTTGATGGAATGTTTGGCCATCGTAAAGGCGGACTCCTTGTGCACCAAATTCCGACTAAACATGGGAATGGATACAGAATTTTATGCCAAGAAAACGGCAACTTTACGCTTGTCTTCAAACGTGGCAATTTGATTGGAGATGGCCATCCACAGCCTGTGGTTGCAGAAGCAAAAGTACAACTTGTGTGCAGCTTTCCATCTTCAGTTGTGGTGCTGGCTGATGAACCTGTGAACAAACTGGATGTGATACAAACTGCTGTTCAGGCTGACCGTGGACCCGGGCGCATTCGTTCTATGCCTATAACTGTAGCAAATGGACGGACAATTAGAGTGTCAGCTGTTGGGATAAGTAACTCTGGAAAAGCTTTTGCCAATTCATCTTCTCTTCCAGTAAGATGGGAATTGAGCAATTGTGATGAGCTAGCATTTTGGGATGGAGCTTACAATTTTCAGAAGGCCAGATCGAGTTGGGAAAGATATGTAGCCTTGAAGAATGCATCAGGACTTTGCGCTATTCATGCTATGGTTAAAAATCATCTTGACTATGGGTATTCATCTTTGAGTGTACCTGCCGATGCTGTCCGTCTTCAGCTAGTCTCGTCTCTCCAAGTGTTTCCGGAATTTGCTTTGGTCTTCTTCAACCCTGATGCTAAGATGAATCTTTCAGTTGTTGGTGGAAGCTGTTTTCTGGATGCTGCTACGAATGATTCTCAAGTTGTGGATGTTATGCAATTTACATCAGGCTTACAGTGTTCGCGGTTGACTCTCATACCAAAAGGGATTGGAACAGCAGTTGTAACAGTCCATGATATAGGACTTTCTCTTCCACTCACAGCCACTTCTCTGGTTAAAGTTGCTGATCTGGATTGGATCAATGTCACATCAGCAAAAGAGCTAAGCTTGATGGAGGGAAGTACAACTGTTGTTGATCTACTAGCAGGGGCTAGTGATGGATATGTATTTGAATCTTCTCAGTATGGATTCATGAACCTGAGTGTGCATTTCAACGATGATATAGTTCAACTTGTAGATGGTGAGAATCTGTCATGTGCTAGTGATGGTTATATCAATTCATCCAGCTTTACAATATATGGCAGAAGTGCTGGACTGACCACTTTCCAAGTTACTGGTAGACAGCATACAGGGCAGGAAATATGCAGTCAAACCTTGCAGGTGGAAGTTTATACCTCCCCTGTGGTGCATCCTCAGGATATCTTCTTGGTTCCTGGTGCATCTTTTGTGCTCACTGTAAAAGGAGGACCAACAAAGGGCGTTGTTCAATACAGCAGTATGAACGATAGTGCTGTGGCTGTTCAAGACTCTTCAGGACGAGTAACTGCAATTTCACCAGGCAATGCTACCATTGTTGCCACTTTTTATGGGAGTGACCACAAAATCCTCTGTCAAGCACTTGGGACAGTGAAAGTTGAGGTTCCAGCTGCTGCTATGCTGAATGTGCAGAGTGAGCAAATGGCTGTTGGTCGTGAGATGCCTATATTTCCTTTCTTACTTGAGGGCAACTTGTTTTCATTCTATGAGCTCTGCAGTAATTTCAAGTGGACTGTAGAGGATGAGAAGGTATTGAGCTTCCGTCCTGCTGCGCATCTGAATAATGACAACTACAAACTGCCACCTCCTGTTCAGAGCAGCTGTGCAGATGAGCATGATGTTGGCTTTATTAAGATTCTGTACGGAAGGTCTGCTGGAAGGAGCAATGTTGTACTTACATTCTCATGTGACTTTTCATCCCCTGGTTCATTCTCACAAATGAGGTCCTATACTGCATCTGTTTCTTTGAGGGTCGTGCCAGATCCTCCTCTTGCTCAAGGGATTCCAATAACATGGATTCTTCCGCCTCATTACACTTCATCAGACCTTTTATCCCCATATTCAGAATCTCATACCAGAAGAGATATCCGAAGTCAAACAGGAGCTATTTCTTACTCCCTATTGGGACACTGTGATAGGACAAATGATGAGCTGCAGAAGGGTGCCATATCCATATACAAAAATAAAATAAAAACTACTGAAAGCAATAATATTGCTTGCATCCAGGCAAAAGACCACAGCACTGGAAGAATTGAGATTGCATCTTGTGTTCGAGTTGCGGAGGTCGCTCAAGTAAGGATTCGAAGGAAGTCGGCACTCCATGTCATTAGTGTTGCCTTAAACACTACATTTGAACTTCCAATAGATTACTTCGATCACTTAGGAAATCCTTTCTTTGAAGCTCATGATGTGGTTACCAGTGACATTCAGACTAATTATCCTGACATTCTTGCCCTTAATATTGTTAGTCCTCACAATGGGAGTGTGTCAGCACAGGCCATTCATCATGGCAGAGCTCTTGTTATGGTCAAATTTGATGATGATCCACATAAGTCGGACTACATCATGGTTTCTGTAGGAGCTCACATAAATCCACAATATCCAGTTCTGTGGCGTGGAACACGTCTGAACTTCAGTATAGAAGGACTTGGTGATCAAGCATCGGGACGGTGGATAAGTGCTAATGAAAGTGTTGCATCTGTGGAATCATTGTCTGGAAAAGCTTTGGCTGTTGAGGAGGGTACAACTCTAGTGATATTTCAAAGCCCAAGCTTGAAGCTGCAGACTACAATTACAGTGCTAAAGGGGAATAGCTTATATGTTGACATTCCAGGGGATACCTTAACCAATGTTTTGGACCCCCCTGGAGTATATAACTTCTCAGTAAAATTGAGTACTGATAAGTTTGGACCTCCTAGTACAAATGTTGAAGTGCCTTATGACTGTAAGGTGGATCCGTCATTTATTGGGTATGCTACGCCATGGAGGGATCTTGCCACTGGTGATTCGTATTGCCTTCTCTACCCTTATCCCCCTGAACATTTGGCTCGTTCTGTATCCAAGACGATGGACAGAAGAAAGGACATATCCGTTTCCATCCATGCTGCATTGAAAGAAGCCAATGAAGTGGCAGGCTCTGCGTCTGCACACTTTATTGGTGGTTTTTCTGTCTTAGATATGGACAAGGATTTGTTGCAGGTAAACTTGACCCCAGAGTCCAACACAAGCATCATAACAGTAATCGGCAATACAGATGTTCTCTACCACTGGTCGAACCATGATCTAATGACAGTTAGGAGCTTATTCAAAGAAGGTTCGGGCCTCGGTTCACGTGCGCAATATGAGGTCAAAGTATTAAAACCGAAGCCTTTCAAGGACAAACTCATTTTTTCACTTCCGGTCAGTGGTCAGAGAGTGGAGGTTGATATATGCTATGAATCAAGCAAGAATAATGCATCTCCAGTATGGATAAAAGTTGTAGTGTCTGCCGCCCTCTTGATTCCAATTATAATCTTCTTTATTCGTTTTCTTGATGGAACTCATAATTCGTTTCCATCTATAAGTCCTTCAAGTCCAAGTGTTGCAACACCTACCACTCCTAACTGCACCAGCCCTGCTATCAGTGCACAGTCTCCTCGTACCCCACAACCCTTCATTGATTATGTCAGAAGGACAATAGATGAAACTCCATACTACCGACGAGAAGGAAGGAGAAGATATGATCCACAAAACACATACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54661.p1 GENE.R_Transcript_54661~~R_Transcript_54661.p1 ORF type:complete len:1935 (+),score=384.93,Big_2|PF02368.14|1.6e+04,Big_2|PF02368.14|0.15,Big_2|PF02368.14|0.00017,Big_2|PF02368.14|2.1e-06,Big_2|PF02368.14|0.87 R_Transcript_54661:162-5966(+)
MFRSTLSIAFAALIFVSANDFTATSISGPHIADVNLLLPPKMTHPVEYRLQGSGGCFKWSWDHHDVLSVLPEYNESSHCSTSARLRSIAPYTGRKETAVYATDIRTGVVIRCKVYIDIFSRIQIFHNSVKLDLDGLATLRVRAFDSEENVFSSLVGLQFLWQLMPESDGSPHHLVHVPLRDSPLSDCGGFCGDLDVQIKLEDSGAFSDLFVVKGAGIGHEAVSVHLFEPQFDKMADDIILTVAEAMSLEPPSPVLVLVGALVQYSLKVIRGNIPQVVPLPSPFHRWSALNASVAQVDAMVGSVQALNLGETSIIVEDTRVAGHVQISSLNVVLPEYISLYLLPLSKSGYPVEGIEPMLSATCWYVVSGRRYLIELKVFSRGPNVQEIYITENEDVKLYFDQPKHWMNFPVLDSTTLKNGRQNSRIIDATFQGLGKLSASLAYITGHAEAKEVLKVVQEVMVCDQVMVVEEARGASLSAILLPWSPDVYQEAELKAVGGCAKSPADYRWLSSDSSILSVSAMGVVQAKRPGKATVKVISVYDSLNYDEVVIEVAVPSFMLMLPNFPVETVVGSHLQAAVTMKAANGDYFYQCDAFSSLVKWSTGSEYFLIVDSTRDAFYKNETKKFDQAKSDYGPICAWSYIYAASPGRAILQATFSKNLDHSFGRQIMLKASSTIASFFPLIVRQAGDGNQFGGYWFNLEKAESHDEVENLDDFYLVPGTLLDVMLLRGPDKWGEGVDYIQTVHIFDGMFGHRKGGLLVHQIPTKHGNGYRILCQENGNFTLVFKRGNLIGDGHPQPVVAEAKVQLVCSFPSSVVVLADEPVNKLDVIQTAVQADRGPGRIRSMPITVANGRTIRVSAVGISNSGKAFANSSSLPVRWELSNCDELAFWDGAYNFQKARSSWERYVALKNASGLCAIHAMVKNHLDYGYSSLSVPADAVRLQLVSSLQVFPEFALVFFNPDAKMNLSVVGGSCFLDAATNDSQVVDVMQFTSGLQCSRLTLIPKGIGTAVVTVHDIGLSLPLTATSLVKVADLDWINVTSAKELSLMEGSTTVVDLLAGASDGYVFESSQYGFMNLSVHFNDDIVQLVDGENLSCASDGYINSSSFTIYGRSAGLTTFQVTGRQHTGQEICSQTLQVEVYTSPVVHPQDIFLVPGASFVLTVKGGPTKGVVQYSSMNDSAVAVQDSSGRVTAISPGNATIVATFYGSDHKILCQALGTVKVEVPAAAMLNVQSEQMAVGREMPIFPFLLEGNLFSFYELCSNFKWTVEDEKVLSFRPAAHLNNDNYKLPPPVQSSCADEHDVGFIKILYGRSAGRSNVVLTFSCDFSSPGSFSQMRSYTASVSLRVVPDPPLAQGIPITWILPPHYTSSDLLSPYSESHTRRDIRSQTGAISYSLLGHCDRTNDELQKGAISIYKNKIKTTESNNIACIQAKDHSTGRIEIASCVRVAEVAQVRIRRKSALHVISVALNTTFELPIDYFDHLGNPFFEAHDVVTSDIQTNYPDILALNIVSPHNGSVSAQAIHHGRALVMVKFDDDPHKSDYIMVSVGAHINPQYPVLWRGTRLNFSIEGLGDQASGRWISANESVASVESLSGKALAVEEGTTLVIFQSPSLKLQTTITVLKGNSLYVDIPGDTLTNVLDPPGVYNFSVKLSTDKFGPPSTNVEVPYDCKVDPSFIGYATPWRDLATGDSYCLLYPYPPEHLARSVSKTMDRRKDISVSIHAALKEANEVAGSASAHFIGGFSVLDMDKDLLQVNLTPESNTSIITVIGNTDVLYHWSNHDLMTVRSLFKEGSGLGSRAQYEVKVLKPKPFKDKLIFSLPVSGQRVEVDICYESSKNNASPVWIKVVVSAALLIPIIIFFIRFLDGTHNSFPSISPSSPSVATPTTPNCTSPAISAQSPRTPQPFIDYVRRTIDETPYYRREGRRRYDPQNTY*

Click here to download the sequence:
Link to NCBI Protein BLAST