Transcript Information: R_Transcript_54662.p1


Annotated TAIR IDAT5G40480.1
Annotated Gene Nameembryo defective 3012
Annotated Gene Symbol(s)EMB3012
Annotation TypeOrtholog
Chromosome Positionchr5:16213361-16223982 | Forward length=1923
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1837694343018
Replicate 21.0542075522828
Replicate 30.97042141489976
Condition 2: 8 Hour
Replicate 10.72996563911766
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.92455604421193
Replicate 20.47294226700506
Replicate 32.0376628840312


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54662.p1 GENE.R_Transcript_54662~~R_Transcript_54662.p1 ORF type:complete len:1912 (+),score=377.57,Big_2|PF02368.14|1.5e+04,Big_2|PF02368.14|0.15,Big_2|PF02368.14|0.00016,Big_2|PF02368.14|2e-06,Big_2|PF02368.14|0.86 R_Transcript_54662:162-5897(+)
ATGTTCCGCTCTACTCTTTCCATCGCTTTCGCTGCTTTAATTTTCGTCTCAGCTAATGATTTCACGGCAACATCGATTTCTGGGCCCCACATTGCTGATGTCAACCTTCTCTTACCTCCCAAAATGACTCATCCTGTTGAGTATCGCCTTCAAGGCAGTGGTGGATGCTTCAAATGGTCATGGGATCATCATGATGTCTTATCTGTTTTACCCGAGTATAACGAAAGCAGCCACTGTTCCACTAGTGCTCGGCTGAGATCAATCGCTCCTTACACTGGACGAAAAGAGACTGCTGTTTATGCAACCGACATTCGCACAGGAGTTGTTATTCGCTGCAAGGTGTATATTGATATATTTTCCAGGATCCAAATATTTCACAACTCTGTTAAACTCGACTTAGATGGCCTTGCAACTCTCCGGGTTCGTGCCTTTGACAGTGAAGAAAATGTGTTCTCATCATTAGTGGGCTTACAATTCCTGTGGCAACTGATGCCTGAAAGTGATGGGTCACCTCATCATCTTGTTCATGTCCCTTTAAGGGATTCTCCTTTGAGTGACTGTGGTGGATTTTGTGGGGATCTGGATGTACAAATAAAGCTTGAAGATAGTGGTGCGTTTTCTGACCTTTTTGTAGTTAAAGGAGCTGGAATCGGGCATGAGGCTGTCTCCGTACATTTGTTTGAACCACAGTTTGACAAAATGGCAGATGATATTATTTTAACTGTAGCAGAAGCCATGTCGCTGGAACCACCTTCCCCAGTTCTTGTTCTAGTTGGTGCATTGGTGCAGTATAGTCTTAAAGTTATCCGTGGAAATATCCCTCAAGTGGTGCCTTTGCCATCTCCATTTCACCGTTGGTCTGCATTAAATGCATCTGTTGCTCAGGTGGATGCTATGGTCGGTTCAGTCCAGGCATTAAACCTAGGGGAAACAAGTATCATAGTTGAGGATACCAGAGTTGCTGGGCACGTGCAAATATCTTCTCTGAATGTTGTCCTGCCAGAATATATATCTTTATACTTGTTGCCTTTGTCTAAATCTGGCTATCCTGTTGAGGGAATAGAGCCTATGCTGTCTGCTACATGTTGGTATGTTGTCTCTGGCCGGCGGTATCTCATTGAATTAAAGGTTTTCTCCCGGGGCCCTAATGTTCAAGAAATATATATCACAGAGAATGAAGATGTGAAATTATACTTCGATCAGCCAAAGCACTGGATGAATTTCCCTGTTCTGGATAGTACTACATTGAAGAATGGTAGGCAAAATTCAAGAATAATTGATGCAACCTTCCAAGGACTTGGAAAGTTGTCAGCGTCTTTAGCATATATTACTGGGCATGCTGAAGCAAAAGAGGTGCTGAAAGTTGTGCAAGAAGTTATGGTTTGCGACCAAGTAATGGTTGTAGAAGAAGCAAGGGGTGCTTCATTGTCAGCCATTCTGCTCCCCTGGTCTCCAGATGTTTATCAGGAGGCAGAGCTCAAAGCTGTAGGAGGTTGCGCAAAATCACCAGCTGACTATAGGTGGCTTTCTTCTGATAGCAGTATTTTATCTGTATCTGCTATGGGTGTTGTGCAAGCTAAAAGGCCTGGGAAAGCTACTGTTAAAGTAATTTCAGTTTATGATAGTCTAAATTATGATGAGGTGGTCATTGAAGTTGCTGTCCCATCTTTCATGTTAATGTTGCCAAACTTTCCGGTAGAGACTGTCGTAGGATCACATCTTCAAGCTGCTGTTACTATGAAAGCAGCAAATGGTGATTATTTTTATCAGTGTGATGCTTTTAGTTCTCTTGTAAAATGGTCTACTGGAAGTGAGTATTTCTTAATTGTCGACTCTACAAGGGATGCATTTTACAAGAATGAAACCAAGAAATTCGACCAAGCAAAATCTGATTATGGTCCTATTTGTGCGTGGAGCTACATTTATGCTGCTAGTCCTGGTCGAGCTATTTTGCAGGCAACATTTTCCAAAAATTTGGATCATAGTTTTGGCAGGCAGATAATGTTGAAAGCATCTTCCACCATTGCGTCCTTCTTCCCTCTAATTGTACGTCAAGCTGGAGATGGGAATCAATTTGGTGGTTACTGGTTCAACTTGGAGAAAGCGGAAAGTCATGATGAAGTAGAAAATTTGGATGATTTTTATCTTGTTCCTGGAACCCTTTTAGATGTCATGCTTCTCAGAGGACCTGACAAATGGGGTGAAGGTGTCGATTATATCCAAACTGTACATATTTTTGATGGAATGTTTGGCCATCGTAAAGGCGGACTCCTTGTGCACCAAATTCCGACTAAACATGGGAATGGATACAGAATTTTATGCCAAGAAAACGGCAACTTTACGCTTGTCTTCAAACGTGGCAATTTGATTGGAGATGGCCATCCACAGCCTGTGGTTGCAGAAGCAAAAGTACAACTTGTGTGCAGCTTTCCATCTTCAGTTGTGGTGCTGGCTGATGAACCTGTGAACAAACTGGATGTGATACAAACTGCTGTTCAGGCTGACCGTGGACCCGGGCGCATTCGTTCTATGCCTATAACTGTAGCAAATGGACGGACAATTAGAGTGTCAGCTGTTGGGATAAGTAACTCTGGAAAAGCTTTTGCCAATTCATCTTCTCTTCCAGTAAGATGGGAATTGAGCAATTGTGATGAGCTAGCATTTTGGGATGGAGCTTACAATTTTCAGAAGGCCAGATCGAGTTGGGAAAGATATGTAGCCTTGAAGAATGCATCAGGACTTTGCGCTATTCATGCTATGGTTAAAAATCATCTTGACTATGGGTATTCATCTTTGAGTGTACCTGCCGATGCTGTCCGTCTTCAGCTAGTCTCGTCTCTCCAAGTGTTTCCGGAATTTGCTTTGGTCTTCTTCAACCCTGATGCTAAGATGAATCTTTCAGTTGTTGGTGGAAGCTGTTTTCTGGATGCTGCTACGAATGATTCTCAAGTTGTGGATGTTATGCAATTTACATCAGGCTTACAGTGTTCGCGGTTGACTCTCATACCAAAAGGGATTGGAACAGCAGTTGTAACAGTCCATGATATAGGACTTTCTCTTCCACTCACAGCCACTTCTCTGGTTAAAGTTGCTGATCTGGATTGGATCAATGTCACATCAGCAAAAGAGCTAAGCTTGATGTATGGATTCATGAACCTGAGTGTGCATTTCAACGATGATATAGTTCAACTTGTAGATGGTGAGAATCTGTCATGTGCTAGTGATGGTTATATCAATTCATCCAGCTTTACAATATATGGCAGAAGTGCTGGACTGACCACTTTCCAAGTTACTGGTAGACAGCATACAGGGCAGGAAATATGCAGTCAAACCTTGCAGGTGGAAGTTTATACCTCCCCTGTGGTGCATCCTCAGGATATCTTCTTGGTTCCTGGTGCATCTTTTGTGCTCACTGTAAAAGGAGGACCAACAAAGGGCGTTGTTCAATACAGCAGTATGAACGATAGTGCTGTGGCTGTTCAAGACTCTTCAGGACGAGTAACTGCAATTTCACCAGGCAATGCTACCATTGTTGCCACTTTTTATGGGAGTGACCACAAAATCCTCTGTCAAGCACTTGGGACAGTGAAAGTTGAGGTTCCAGCTGCTGCTATGCTGAATGTGCAGAGTGAGCAAATGGCTGTTGGTCGTGAGATGCCTATATTTCCTTTCTTACTTGAGGGCAACTTGTTTTCATTCTATGAGCTCTGCAGTAATTTCAAGTGGACTGTAGAGGATGAGAAGGTATTGAGCTTCCGTCCTGCTGCGCATCTGAATAATGACAACTACAAACTGCCACCTCCTGTTCAGAGCAGCTGTGCAGATGAGCATGATGTTGGCTTTATTAAGATTCTGTACGGAAGGTCTGCTGGAAGGAGCAATGTTGTACTTACATTCTCATGTGACTTTTCATCCCCTGGTTCATTCTCACAAATGAGGTCCTATACTGCATCTGTTTCTTTGAGGGTCGTGCCAGATCCTCCTCTTGCTCAAGGGATTCCAATAACATGGATTCTTCCGCCTCATTACACTTCATCAGACCTTTTATCCCCATATTCAGAATCTCATACCAGAAGAGATATCCGAAGTCAAACAGGAGCTATTTCTTACTCCCTATTGGGACACTGTGATAGGACAAATGATGAGCTGCAGAAGGGTGCCATATCCATATACAAAAATAAAATAAAAACTACTGAAAGCAATAATATTGCTTGCATCCAGGCAAAAGACCACAGCACTGGAAGAATTGAGATTGCATCTTGTGTTCGAGTTGCGGAGGTCGCTCAAGTAAGGATTCGAAGGAAGTCGGCACTCCATGTCATTAGTGTTGCCTTAAACACTACATTTGAACTTCCAATAGATTACTTCGATCACTTAGGAAATCCTTTCTTTGAAGCTCATGATGTGGTTACCAGTGACATTCAGACTAATTATCCTGACATTCTTGCCCTTAATATTGTTAGTCCTCACAATGGGAGTGTGTCAGCACAGGCCATTCATCATGGCAGAGCTCTTGTTATGGTCAAATTTGATGATGATCCACATAAGTCGGACTACATCATGGTTTCTGTAGGAGCTCACATAAATCCACAATATCCAGTTCTGTGGCGTGGAACACGTCTGAACTTCAGTATAGAAGGACTTGGTGATCAAGCATCGGGACGGTGGATAAGTGCTAATGAAAGTGTTGCATCTGTGGAATCATTGTCTGGAAAAGCTTTGGCTGTTGAGGAGGGTACAACTCTAGTGATATTTCAAAGCCCAAGCTTGAAGCTGCAGACTACAATTACAGTGCTAAAGGGGAATAGCTTATATGTTGACATTCCAGGGGATACCTTAACCAATGTTTTGGACCCCCCTGGAGTATATAACTTCTCAGTAAAATTGAGTACTGATAAGTTTGGACCTCCTAGTACAAATGTTGAAGTGCCTTATGACTGTAAGGTGGATCCGTCATTTATTGGGTATGCTACGCCATGGAGGGATCTTGCCACTGGTGATTCGTATTGCCTTCTCTACCCTTATCCCCCTGAACATTTGGCTCGTTCTGTATCCAAGACGATGGACAGAAGAAAGGACATATCCGTTTCCATCCATGCTGCATTGAAAGAAGCCAATGAAGTGGCAGGCTCTGCGTCTGCACACTTTATTGGTGGTTTTTCTGTCTTAGATATGGACAAGGATTTGTTGCAGGTAAACTTGACCCCAGAGTCCAACACAAGCATCATAACAGTAATCGGCAATACAGATGTTCTCTACCACTGGTCGAACCATGATCTAATGACAGTTAGGAGCTTATTCAAAGAAGGTTCGGGCCTCGGTTCACGTGCGCAATATGAGGTCAAAGTATTAAAACCGAAGCCTTTCAAGGACAAACTCATTTTTTCACTTCCGGTCAGTGGTCAGAGAGTGGAGGTTGATATATGCTATGAATCAAGCAAGAATAATGCATCTCCAGTATGGATAAAAGTTGTAGTGTCTGCCGCCCTCTTGATTCCAATTATAATCTTCTTTATTCGTTTTCTTGATGGAACTCATAATTCGTTTCCATCTATAAGTCCTTCAAGTCCAAGTGTTGCAACACCTACCACTCCTAACTGCACCAGCCCTGCTATCAGTGCACAGTCTCCTCGTACCCCACAACCCTTCATTGATTATGTCAGAAGGACAATAGATGAAACTCCATACTACCGACGAGAAGGAAGGAGAAGATATGATCCACAAAACACATACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54662.p1 GENE.R_Transcript_54662~~R_Transcript_54662.p1 ORF type:complete len:1912 (+),score=377.57,Big_2|PF02368.14|1.5e+04,Big_2|PF02368.14|0.15,Big_2|PF02368.14|0.00016,Big_2|PF02368.14|2e-06,Big_2|PF02368.14|0.86 R_Transcript_54662:162-5897(+)
MFRSTLSIAFAALIFVSANDFTATSISGPHIADVNLLLPPKMTHPVEYRLQGSGGCFKWSWDHHDVLSVLPEYNESSHCSTSARLRSIAPYTGRKETAVYATDIRTGVVIRCKVYIDIFSRIQIFHNSVKLDLDGLATLRVRAFDSEENVFSSLVGLQFLWQLMPESDGSPHHLVHVPLRDSPLSDCGGFCGDLDVQIKLEDSGAFSDLFVVKGAGIGHEAVSVHLFEPQFDKMADDIILTVAEAMSLEPPSPVLVLVGALVQYSLKVIRGNIPQVVPLPSPFHRWSALNASVAQVDAMVGSVQALNLGETSIIVEDTRVAGHVQISSLNVVLPEYISLYLLPLSKSGYPVEGIEPMLSATCWYVVSGRRYLIELKVFSRGPNVQEIYITENEDVKLYFDQPKHWMNFPVLDSTTLKNGRQNSRIIDATFQGLGKLSASLAYITGHAEAKEVLKVVQEVMVCDQVMVVEEARGASLSAILLPWSPDVYQEAELKAVGGCAKSPADYRWLSSDSSILSVSAMGVVQAKRPGKATVKVISVYDSLNYDEVVIEVAVPSFMLMLPNFPVETVVGSHLQAAVTMKAANGDYFYQCDAFSSLVKWSTGSEYFLIVDSTRDAFYKNETKKFDQAKSDYGPICAWSYIYAASPGRAILQATFSKNLDHSFGRQIMLKASSTIASFFPLIVRQAGDGNQFGGYWFNLEKAESHDEVENLDDFYLVPGTLLDVMLLRGPDKWGEGVDYIQTVHIFDGMFGHRKGGLLVHQIPTKHGNGYRILCQENGNFTLVFKRGNLIGDGHPQPVVAEAKVQLVCSFPSSVVVLADEPVNKLDVIQTAVQADRGPGRIRSMPITVANGRTIRVSAVGISNSGKAFANSSSLPVRWELSNCDELAFWDGAYNFQKARSSWERYVALKNASGLCAIHAMVKNHLDYGYSSLSVPADAVRLQLVSSLQVFPEFALVFFNPDAKMNLSVVGGSCFLDAATNDSQVVDVMQFTSGLQCSRLTLIPKGIGTAVVTVHDIGLSLPLTATSLVKVADLDWINVTSAKELSLMYGFMNLSVHFNDDIVQLVDGENLSCASDGYINSSSFTIYGRSAGLTTFQVTGRQHTGQEICSQTLQVEVYTSPVVHPQDIFLVPGASFVLTVKGGPTKGVVQYSSMNDSAVAVQDSSGRVTAISPGNATIVATFYGSDHKILCQALGTVKVEVPAAAMLNVQSEQMAVGREMPIFPFLLEGNLFSFYELCSNFKWTVEDEKVLSFRPAAHLNNDNYKLPPPVQSSCADEHDVGFIKILYGRSAGRSNVVLTFSCDFSSPGSFSQMRSYTASVSLRVVPDPPLAQGIPITWILPPHYTSSDLLSPYSESHTRRDIRSQTGAISYSLLGHCDRTNDELQKGAISIYKNKIKTTESNNIACIQAKDHSTGRIEIASCVRVAEVAQVRIRRKSALHVISVALNTTFELPIDYFDHLGNPFFEAHDVVTSDIQTNYPDILALNIVSPHNGSVSAQAIHHGRALVMVKFDDDPHKSDYIMVSVGAHINPQYPVLWRGTRLNFSIEGLGDQASGRWISANESVASVESLSGKALAVEEGTTLVIFQSPSLKLQTTITVLKGNSLYVDIPGDTLTNVLDPPGVYNFSVKLSTDKFGPPSTNVEVPYDCKVDPSFIGYATPWRDLATGDSYCLLYPYPPEHLARSVSKTMDRRKDISVSIHAALKEANEVAGSASAHFIGGFSVLDMDKDLLQVNLTPESNTSIITVIGNTDVLYHWSNHDLMTVRSLFKEGSGLGSRAQYEVKVLKPKPFKDKLIFSLPVSGQRVEVDICYESSKNNASPVWIKVVVSAALLIPIIIFFIRFLDGTHNSFPSISPSSPSVATPTTPNCTSPAISAQSPRTPQPFIDYVRRTIDETPYYRREGRRRYDPQNTY*

Click here to download the sequence:
Link to NCBI Protein BLAST