Transcript Information: R_Transcript_54801.p1


Annotated TAIR IDAT5G39900.1
Annotated Gene NameSmall GTP-binding protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15976719-15978925 | Reverse length=663
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.2561847863135
Replicate 25.4350977965148
Replicate 37.3061551346742
Condition 2: 8 Hour
Replicate 17.2061636439504
Replicate 27.7866861265146
Replicate 39.9568156869919
Condition 3: 24 Hour
Replicate 19.2326466663032
Replicate 27.9861106922738
Replicate 310.083857783332


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54801.p1 GENE.R_Transcript_54801~~R_Transcript_54801.p1 ORF type:5prime_partial len:649 (+),score=131.05,GTP_EFTU|PF00009.23|1.7e-51,LepA_C|PF06421.8|1.9e-49,EFG_C|PF00679.20|5e-23,GTP_EFTU_D2|PF03144.21|2.1e-06 R_Transcript_54801:2-1948(+)
ATCAGACAAATTCACAACCTAAACAACTCATTAGCCCCATTAACATTAGAGAGTGGTTTGAACTTGAGCCATTCATTTTGCTCTCAATCTCGCAAGAAAGATAATGATAATATAGATTTGAGCCAATTCCCACCTGAGAGAATCCGTAACTTTTCCATTATTGCCCATGTGGATCATGGCAAGTCTACTCTTGCTGACAGACTCTTGGAGCTCACTGGAACTATCAAGAAAGGTCATGGTCAACCTCAGTATCTTGATAAACTCCAGGTGGAGAGAGAAAGAGGGATAACTGTTAAGGCACAGACAGCTACTATGTTCCACAAGTACATCTCTCATGTTGCAAATCCAGAAGGCATGGCAACATACTTACTCAATTTGATCGATACACCAGGTCATGTTGATTTTAGCTATGAAGTATCAAGATCGTTAGCTGCTTGCCAAGGAGCTCTTCTAGTAGTTGATGCTGCTCAAGGTGTTCAGGCACAAACTGTTGCCAATTTTTATCTTGCTTTTGAGTCAAACCTGACCATTATCCCAGTCATAAACAAAATTGATCAGCCAACTGCTGATCCTGATCGTGTTAAGGCGCAACTGAAATCAATGTTTGATCTTGATCCAAGAGATGCCCTTCTCACATCTGCTAAGACAGGTCAAGGTCTTGAGCACGTCCTTCCTGCCGTGATACAGCGAATACCTCCTCCCCCTGGGAAGATTGATTTGCCATTACGTATGCTCTTATTAGATTCATATTATGATGAATACAAAGGAGTTATATGTCATGTTGCTATTGTTGATGGAACATTGCGCAAAGGTGACAAAATTTCATCTGTGGCAACTAGCCAAACTTATGAAGTTTCAGATGTTGGAATCATGCATCCTGAGCTTGTGGCAACTGGAGTCCTTTTTACGGGACAAGTGGGGTATGTGGTCAGTGGCATGCGTTCAACCAAAGAGGCACGGGTTGGTGATACCCTGTATAATGTACGTAGTGTTGTGGAGCCCCTTCCAGGTTTCAAGCGTGCAAAACATATGGTTTTCTCTGGTCTGTATCCAGCTGATGGATCAGATTTTGAAGCACTTAATCATGCAATTGAGAGGTTGACATGCAATGATGCCAGTGTATTCGTTACCAAAGAAACGAGCACAGCACTTGGTCTAGGTTTCAGGTGTGGTTTTTTAGGTTTACTCCATATGGATGTTTTCCATCAACGTCTTGAGCAGGAATATGGAGCTCGCATCATATCTACTGTTCCAACTGTGCCATATATATTTCAATATTCTGATGGAAGCAAAGTTGAAGTTCAAAATCCCGCTTCGTTGCCATCAAATCCAAAGAAACGAGTTACGGCTTGCTGGGAACCTACAGTTGTAGCAACCATTATTATCCCTAGTGAGTATGTAGGACCTGTAATGACTCTTTGTTCCGATCGAAGGGGGGAGCAGCTGGAGTACTCTTTCATAGATAGTCAAAGGGTATTCATGAAGTACCGGTTACCTTTACGGGAAATTGTTGTTGACTTTTACGATCAATTAAAAAGTATTACTTCAGGATATGCTTCTTTCGACTATGAAGACTCAGAATATCAATCCTCTGATTTGGTGAAACTGGATATCCTTTTGAATGGACAACCAGTGGATGCAATGGCAACTATTGTTCATAATTTGAAGGCACAACGTGTTGGTCGTCAACTGGTTGAGAAGTTGAAACAAGTCATAGACAGGCAAATGTTTGAAGTGACAATTCAAGCTGCGATTGGATCTAAGGTTATTGCAAGGGAGACTATTTCTGCGATGAGAAAGAATGTGCTTGCTAAATGTTATGGTGGTGATGTTACACGAAAGAAGAAGCTTTTGGAGAAGCAAAAGGAAGGAAAGAAGCGGATGAAACGGGTTGGTTCTGTTGATGTACCACAGGAAGCATTTCATGAGCTGTTGAAGGTTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54801.p1 GENE.R_Transcript_54801~~R_Transcript_54801.p1 ORF type:5prime_partial len:649 (+),score=131.05,GTP_EFTU|PF00009.23|1.7e-51,LepA_C|PF06421.8|1.9e-49,EFG_C|PF00679.20|5e-23,GTP_EFTU_D2|PF03144.21|2.1e-06 R_Transcript_54801:2-1948(+)
IRQIHNLNNSLAPLTLESGLNLSHSFCSQSRKKDNDNIDLSQFPPERIRNFSIIAHVDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFHKYISHVANPEGMATYLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQGVQAQTVANFYLAFESNLTIIPVINKIDQPTADPDRVKAQLKSMFDLDPRDALLTSAKTGQGLEHVLPAVIQRIPPPPGKIDLPLRMLLLDSYYDEYKGVICHVAIVDGTLRKGDKISSVATSQTYEVSDVGIMHPELVATGVLFTGQVGYVVSGMRSTKEARVGDTLYNVRSVVEPLPGFKRAKHMVFSGLYPADGSDFEALNHAIERLTCNDASVFVTKETSTALGLGFRCGFLGLLHMDVFHQRLEQEYGARIISTVPTVPYIFQYSDGSKVEVQNPASLPSNPKKRVTACWEPTVVATIIIPSEYVGPVMTLCSDRRGEQLEYSFIDSQRVFMKYRLPLREIVVDFYDQLKSITSGYASFDYEDSEYQSSDLVKLDILLNGQPVDAMATIVHNLKAQRVGRQLVEKLKQVIDRQMFEVTIQAAIGSKVIARETISAMRKNVLAKCYGGDVTRKKKLLEKQKEGKKRMKRVGSVDVPQEAFHELLKVS*

Click here to download the sequence:
Link to NCBI Protein BLAST