Transcript Information: R_Transcript_54813.p1


Annotated TAIR IDAT3G49080.1
Annotated Gene NameRibosomal protein S5 domain 2-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18194500-18196657 | Reverse length=430
E-Value1.7E-124
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.675265963954
Replicate 216.246494666596
Replicate 316.841457461439
Condition 2: 8 Hour
Replicate 116.428819411905
Replicate 214.945576551949
Replicate 318.291597334683
Condition 3: 24 Hour
Replicate 123.784052217904
Replicate 223.586086628484
Replicate 324.532234559093


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54813.p1 GENE.R_Transcript_54813~~R_Transcript_54813.p1 ORF type:5prime_partial len:389 (+),score=104.77,Ribosomal_S9|PF00380.15|9.7e-46 R_Transcript_54813:3-1169(+)
ACCACCACCACCATTATACTCGGAGCAATAGCAATGCTTTCACGTTTCATCACCAATTCTGCACGCCATCTTCGTTTCTTCTCTTTCAAAGCCAAACCCATTTTCTCAACCCCGCATTTCCACACTTCTCCCTCTATTTCTCCAAACCCTCTTTCCCGTTTCCCCCAATTTCCCATCTTTCCTTCTACCCACCTCACCTCTCACTCTTTCTCAACCGACAACAGCAACAACAATGATGAAAACAACAAAAACCCCACCTCAGATTTGTGGGATGTAACGCCTAAAGATGACAACTTTATTGATGTTTTTGGCAAAAATAATGTGAGTCATAGTCAAGACGCTTCTTGGCCAAGTGGGGTTGGTCAAGAAAAAGATGATAAGGAGGTTTGGAGTTTAGATGTTGAGGAGAAAATTGAGGATGTCTTTGATTTGGGGGGTGTTGAAATGGCTCAAGAAACTTATGATGGGCTTCAACTTCATGAAAAAAAGGTTAATACTGAAGATGATTTGAAGCTTCAGGAAGAAGAACAGGCTCTCATGGCTGTCCTTGAAGGCCCAAACCGTGCATTTGGTGATCTTGTTGCTGCATCTGGAATCACAGATGCTATGCTGGATAGTTTGATTGCTTTGAAGGATTTTAAAAATATTGAAGGTTTGCCACCTTTAACGGAAATAGAAGACCAGCGTTATGAGAATAGCTTAAAAAAATCATCAAGGTATGAGATGGAGCTTCAGAAACAGGAGGAAGCTGCAAAGGCACGGGTTAGGCAAGTGGATGAGAAAGGAAGGGCTTATGGAACAGGAAGGAGAAAGTGTAGTATAGCTAGAGTTTGGATTCAACCTGGCGAAGGAAAGTTTTTCATAAATGACAAGGAGTTTGATGTTTATTTCCCAATGCTTGATCACCGTGCTGCTCTTCTTCGACCATTTGCTGAGACAAAGACATTGGGTCTTTGGGATGTCAAATGCACCGTGAAAGGAGGTGGTGTCTCAGGTCAGGTGGGGGCAATTCGATTAGGCACCAGCAGGGCATTGCAAAATTGGGAGCCTGGATTGCGTCCTCCACTCCGAGAAGCGGGCTTCTCGACAAGGGATCCTCGAGTGGTGGAACGGAAAAAGCCTGGAAAAGCCAAAGCAAGGAAGAGCTTCCAATGGGTCAAGCGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54813.p1 GENE.R_Transcript_54813~~R_Transcript_54813.p1 ORF type:5prime_partial len:389 (+),score=104.77,Ribosomal_S9|PF00380.15|9.7e-46 R_Transcript_54813:3-1169(+)
TTTTIILGAIAMLSRFITNSARHLRFFSFKAKPIFSTPHFHTSPSISPNPLSRFPQFPIFPSTHLTSHSFSTDNSNNNDENNKNPTSDLWDVTPKDDNFIDVFGKNNVSHSQDASWPSGVGQEKDDKEVWSLDVEEKIEDVFDLGGVEMAQETYDGLQLHEKKVNTEDDLKLQEEEQALMAVLEGPNRAFGDLVAASGITDAMLDSLIALKDFKNIEGLPPLTEIEDQRYENSLKKSSRYEMELQKQEEAAKARVRQVDEKGRAYGTGRRKCSIARVWIQPGEGKFFINDKEFDVYFPMLDHRAALLRPFAETKTLGLWDVKCTVKGGGVSGQVGAIRLGTSRALQNWEPGLRPPLREAGFSTRDPRVVERKKPGKAKARKSFQWVKR*

Click here to download the sequence:
Link to NCBI Protein BLAST