Transcript Information: R_Transcript_54818.p1


Annotated TAIR IDAT3G49080.1
Annotated Gene NameRibosomal protein S5 domain 2-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18194500-18196657 | Reverse length=430
E-Value3E-113
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.2402769920397
Replicate 210.15781117397
Replicate 38.5686050858426
Condition 2: 8 Hour
Replicate 15.9840767202744
Replicate 26.3011961298104
Replicate 39.0984382411416
Condition 3: 24 Hour
Replicate 111.50752930865
Replicate 212.210143325955
Replicate 313.099873129315


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54818.p1 GENE.R_Transcript_54818~~R_Transcript_54818.p1 ORF type:internal len:401 (-),score=92.41,Ribosomal_S9|PF00380.15|1.1e-38 R_Transcript_54818:3-1202(-)
CCCCGCCCGCCCCCTCCCCCCCTCCCCCCCCCCCGCCCCCGCACCCCCGCGCCCCCCCCCCCCCACCCCCCCACCACCACCACCACCATCACCATTATACTCAGAGCGATAGCAATGCTTTCACGTTTCATCACCAATTCTGCACGCCATCTTCGTTTCTTCTCTTTCAAAGCCAAACCCATTTTCTCAACCCCGCATTTCCACACTTCTCCCTCTATTTATCCAACCCCACTTTCCCGTTTCCCCCAATTTCCCATCTTTCCTTCTACCCACCTCAACTCTCACTCTTTCTCAACCAACAACGGCAACAATGATGAAAACAACAAAAACCCCACCTCAGATTTGTGGGATGTAACGCCTAAAGATGACAACTTTATTGATGTTTTTGGCAAAAATAATGTGAGTCATAGTCAAGACGCTTCTTGGCCAAGTGGGGTTGGTCAAGAAAAAGATGATAAGGAGGTTTGGAGTTTAGATGTTGAGGCGAAAATTGAGGATGTCTTTGATTTGGGGGGTGTTGGAATGGCTCAAGAAACTTTTGATGGGCTTCAACTTCATGAAGAAAAGGTTAATACTGAAGATGATTTGAAGCTTCAGGAAGAAGAACGGGCTCTCATGGCTGTCTTTGAAGGCCCAAACCGTGCATTTGGTGATCTTGTTGCTGCATCTGGAATCACAGATGCTATGCTGGATAGTTTGATTGCTTTGAAGGATTTTAAAAATATTGAAGGTTTGCCACCTTTAACGGAAATAGAAGACCAGCGTTATGAGAATAGCTTAAAAAAATCATCAAGGTATGAGATGGAGCTTCAGAAACAGGAGGAAGCTGCAAAGGCACGGGTTAGGCAAGTGGATGAGAAAGGAAGGGCTTATGGAACAGGAAGGAGAAAGTGTAGTATAGCTAGAGTTTGGATTCAACCTGGCGAAGGAAAGTTTTTCATAAATGACAAGGAGTTTGATGTTTATTTCCCAATGCTTGATCACCGTGCTGCTCTTCTTCGACCATTTGCTGAGACAAAGACATTGGGTCTTTGGGATGTCAAATGCACCGTGAAAGGAGGTGGTGTCTCAGGTCAAGTGGGGGCAATTCGATTAGGCATCAGCAGGGCATTGCAAAATTGGGAGCCTGGATTGCGTCCTCCACTCCGAGAAGCTGGCTTCTTGACAAGGGATCCTCGAGTGGTGGAACGGAAAAAGCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54818.p1 GENE.R_Transcript_54818~~R_Transcript_54818.p1 ORF type:internal len:401 (-),score=92.41,Ribosomal_S9|PF00380.15|1.1e-38 R_Transcript_54818:3-1202(-)
PRPPPPPLPPPRPRTPAPPPPHPPTTTTTITIILRAIAMLSRFITNSARHLRFFSFKAKPIFSTPHFHTSPSIYPTPLSRFPQFPIFPSTHLNSHSFSTNNGNNDENNKNPTSDLWDVTPKDDNFIDVFGKNNVSHSQDASWPSGVGQEKDDKEVWSLDVEAKIEDVFDLGGVGMAQETFDGLQLHEEKVNTEDDLKLQEEERALMAVFEGPNRAFGDLVAASGITDAMLDSLIALKDFKNIEGLPPLTEIEDQRYENSLKKSSRYEMELQKQEEAAKARVRQVDEKGRAYGTGRRKCSIARVWIQPGEGKFFINDKEFDVYFPMLDHRAALLRPFAETKTLGLWDVKCTVKGGGVSGQVGAIRLGISRALQNWEPGLRPPLREAGFLTRDPRVVERKKP

Click here to download the sequence:
Link to NCBI Protein BLAST