Transcript Information: R_Transcript_54867.p1


Annotated TAIR IDAT5G48610.1
Annotated Gene Nameunknown protein; Has 43043 Blast hits to 23768 proteins in 1327 species: Archae - 108; Bacteria - 3952; Metazoa - 17076; Fungi - 3614; Plants - 1643; Viruses - 204; Other Eukaryotes - 16446 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19712614-19714861 | Forward length=354
E-Value1.6E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.887159625315
Replicate 212.627668221902
Replicate 312.064758591568
Condition 2: 8 Hour
Replicate 114.15997528088
Replicate 213.527935633457
Replicate 312.919295815222
Condition 3: 24 Hour
Replicate 114.910319640769
Replicate 212.636642994245
Replicate 313.903755468367


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54867.p1 GENE.R_Transcript_54867~~R_Transcript_54867.p1 ORF type:complete len:562 (+),score=172.89 R_Transcript_54867:1182-2867(+)
ATGTCTCGTTGCTTTCCTTTTCCTCCCCCAGGATATGAGAGCAAGACCAAAGCAAATGACCTCGACCTCCTGCTTAAAAAGGAAAAGCACAAAGAGAAGAAACACAAAAAGGAGAAGAGGGACAAGGAGAAGAAAGAGGGCAAAGAAAAACGTGAGAAAGATAGAAATGATGAAAAGCATAGGGAAAAGAAAGACAAAAAGGAGAAGTCTAGAGACAAAAAGAAGGATAAGGAGAAGGATGGCTATAAGGATAAACATAAAAGTGATAGCTCTTGTCCAGATGAGAAGAGGGTCATGGGTCCCTCTGGAGGCCTCCTTGCTATGCCCTCTGAGAAGAGCAAGGACCGGGAAAAGGACAGAAATGCTATGTTGGCTGAGAAGAAAGTTGCAGGGGTGTCTACATTTCGCAACGGGGAGCAGGTTAGTAAAAGTTATTTTCAGGCTTCTTCTGAAATCAAGAGCAACCCCCTCACTCCTGAGACAAAAAGCACCAGATTTGGCCCTGAATTGGCCCAGAGGAGCTATGATGGAGAAAGGAGACCTATTAGTCAATTTCCTGATAAGATTGTTGGCACAGAGGCTAAGAAGGCTGATGAAGTGGCCAGGGTGGTGGGGAAGAGTGCTGGACCTGTGGTGGATGGGAAAGAAAGGAGCAAGGATAAAGCAGCTCCGGATGGGAGGGTTGATGTTCGGGGTGTTGTTGGGGAGTCTAGATCTAGCGGAAATGCCTTGGTTTCAAATTCTGTTGGACTGGTTCAAATTAGAGTTGCAGGAGCAGCCAGGCCTATGGAGAAAAAAGCTGGCCAGAAAGTGGAGGGGAACGGCAAGCTCAGAGAAAAAGAAGGTGATGATAGAAAAGGAAACAAATGGAAGGATAGAGAAAAGCCGATCCACAGGGATAAGGATAGGGAGAAGGAAAAGAAGAAAGAGGAGAAAGTGAAGGCAACAAGTGAACAGAAGCATATAGACCAGTCACAAATAAAAGACAGCAGTGATAACCACATGCTGACGTTTAGTGTAAAGGATGGAATCAAGAAGGAATTTTCAAGTGCCCCGAATGCTGGAGTTCAGAAAATACCTAAAGAGAGCCATCATGTTGCTCCTAATAATCTTGGGAAACGGAAGGACATTGGGCTCAATGGAATTGATGATGAGCATAGCACTGGGCCTCATAAGCTGGCAAGAACCACGGCCTCCCCTCATCCATTGACAGAGAATGGAAGGAGCTTAGAGCCTTGCCAGAATTCTGCTGCCTTAGCTCCTGGTACACAGCGCCCACCTATGAACATTAAAGTGGAGCGCACCTTTGCTCCTGATGATACGCAGAGGCCTCCCACGAATATTAAAGTGGATGGCAAGGAGCGCAAGATTAATGGCATAATTTCTCAGCCGGTTACACAGCAGCCTTCTCAAACGAGTGCCAAAGCAGAGCAAAAATCGGTTGCTCCCTCAAAGCCGCCTCATCCAGATATCAAGTATCTCAGCCAGGTACTCTCGGTGCCTAAAGTGGATGATTGGTCTGATTTCGATGACCAAGAGTGGTTGTTTAACAGCTCTAGCTCCCAAACAAGGACGCTGGAAGCCGAATCTTCTGGTATTGACAAGCCACCACAGCAGGTATGGGCAAAAGCCTTGTGGTTAGAGCCAGTTGATGTTTACGCATTGCCATATGTCATTCCTCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54867.p1 GENE.R_Transcript_54867~~R_Transcript_54867.p1 ORF type:complete len:562 (+),score=172.89 R_Transcript_54867:1182-2867(+)
MSRCFPFPPPGYESKTKANDLDLLLKKEKHKEKKHKKEKRDKEKKEGKEKREKDRNDEKHREKKDKKEKSRDKKKDKEKDGYKDKHKSDSSCPDEKRVMGPSGGLLAMPSEKSKDREKDRNAMLAEKKVAGVSTFRNGEQVSKSYFQASSEIKSNPLTPETKSTRFGPELAQRSYDGERRPISQFPDKIVGTEAKKADEVARVVGKSAGPVVDGKERSKDKAAPDGRVDVRGVVGESRSSGNALVSNSVGLVQIRVAGAARPMEKKAGQKVEGNGKLREKEGDDRKGNKWKDREKPIHRDKDREKEKKKEEKVKATSEQKHIDQSQIKDSSDNHMLTFSVKDGIKKEFSSAPNAGVQKIPKESHHVAPNNLGKRKDIGLNGIDDEHSTGPHKLARTTASPHPLTENGRSLEPCQNSAALAPGTQRPPMNIKVERTFAPDDTQRPPTNIKVDGKERKINGIISQPVTQQPSQTSAKAEQKSVAPSKPPHPDIKYLSQVLSVPKVDDWSDFDDQEWLFNSSSSQTRTLEAESSGIDKPPQQVWAKALWLEPVDVYALPYVIPH*

Click here to download the sequence:
Link to NCBI Protein BLAST