Transcript Information: R_Transcript_54878.p1


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.73431452116685
Replicate 20.36200517959135
Replicate 30.92153542053487
Condition 2: 8 Hour
Replicate 10.42217008529733
Replicate 20.38553244553768
Replicate 30.52159800633296
Condition 3: 24 Hour
Replicate 10.5277656833955
Replicate 20.7605261686406
Replicate 30.37737421873961


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54878.p1 GENE.R_Transcript_54878~~R_Transcript_54878.p1 ORF type:3prime_partial len:174 (+),score=19.47 R_Transcript_54878:716-1234(+)
ATGGATCAAACCAATCAAAATTCAGTCAATGCTCCTGATGTTGGTTTTGCAGGATTTACTCAATCTCAAGTGGACCACTTGTTCAATCTTTTCAAAGAAAAACAGGTTCAAGAAAATTCTTCTAATCGCATGAGTGGTAAGGATTATATTCATTCTAGCATAAAATGGGTTCTTGATACTGGAGCCTCCCATCATATAACTTGCGAACCTCGGGTTATTTTTGATACTTATCATCTTGATACACCAATTCATATTACCATTCCTAATGGAGACACTATAAGTGTTGTTAAAGCTGGGAAGGTGAAATTGGATTCAAATTTGGTATTACAGGATGTTTTATATATTCCTAGTTTTACTTGTAATTTAATTTCGGTTCGGAAATTAACTGAGGATGCAAATTGTATAGTCTCTTACTCTCCCACTCATTGTCTCATACAGGATTATGCCTCGAGGAAGGTGATTGGAGTGGGTAGCTTGAGCAATGGGGTCTACTATTGGAAAGGCATGGCAAATGGTTCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54878.p1 GENE.R_Transcript_54878~~R_Transcript_54878.p1 ORF type:3prime_partial len:174 (+),score=19.47 R_Transcript_54878:716-1234(+)
MDQTNQNSVNAPDVGFAGFTQSQVDHLFNLFKEKQVQENSSNRMSGKDYIHSSIKWVLDTGASHHITCEPRVIFDTYHLDTPIHITIPNGDTISVVKAGKVKLDSNLVLQDVLYIPSFTCNLISVRKLTEDANCIVSYSPTHCLIQDYASRKVIGVGSLSNGVYYWKGMANGS

Click here to download the sequence:
Link to NCBI Protein BLAST