Transcript Information: R_Transcript_54886.p1


Annotated TAIR IDAT1G79430.2
Annotated Gene NameHomeodomain-like superfamily protein
Annotated Gene Symbol(s)APL, WDY
Annotation TypeHomolog
Chromosome Positionchr1:29877521-29879135 | Reverse length=358
E-Value4E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9267014341092
Replicate 22.0996300416298
Replicate 31.9088947996794
Condition 2: 8 Hour
Replicate 12.3125539116843
Replicate 22.3603153054585
Replicate 32.1176879057118
Condition 3: 24 Hour
Replicate 12.4233240962577
Replicate 22.2055258890577
Replicate 32.1887704686897


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54886.p1 GENE.R_Transcript_54886~~R_Transcript_54886.p1 ORF type:complete len:180 (+),score=24.21 R_Transcript_54886:28-540(+)
ATGAAGGATCAATTTGGTCCTAATCCCATGAACTTCCCATCTCTCCAAGAATTAAACATCTACGGTCCGGGCGACCAGCCATTGGAAAACTTCCTTCAACTCCAAGGTGGTGGTACTGACAACAATATTTGCTTAGGAAAAAAAAGGCCAAACCCATTCAATGGGAATATTAATCATGGCAAAAGCCCCTTAATTTGGTTTGATGATTTGACGGCGGCCACTTGCCTAGGGCCGCCGCCTCAAGATCATCAAGACCCTTTCAAAGGGGCTAGTCATGACATTCAAATTGGGCCACCAAATATTGATCATCGCACTAGCCCGGATCAGATTGAGTCCATGCCCCCCGAAATTTACGAGTCCAAATCCATTGGCACCGGCGCCCTAGCCGGTGCTGGGGAATTGGGGGCAGATCCGAAATTCGAGGCATCGCTAAAGCTAGAGAGGCCATCTCCAAGACGAGCACCCATTGCCACTACAATGTCACAAGGGAGAGGCTCACCTTATGCAACCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54886.p1 GENE.R_Transcript_54886~~R_Transcript_54886.p1 ORF type:complete len:180 (+),score=24.21 R_Transcript_54886:28-540(+)
MKDQFGPNPMNFPSLQELNIYGPGDQPLENFLQLQGGGTDNNICLGKKRPNPFNGNINHGKSPLIWFDDLTAATCLGPPPQDHQDPFKGASHDIQIGPPNIDHRTSPDQIESMPPEIYESKSIGTGALAGAGELGADPKFEASLKLERPSPRRAPIATTMSQGRGSPYAT*

Click here to download the sequence:
Link to NCBI Protein BLAST