Transcript Information: R_Transcript_54888.p1


Annotated TAIR IDAT1G79430.2
Annotated Gene NameHomeodomain-like superfamily protein
Annotated Gene Symbol(s)APL, WDY
Annotation TypeOrtholog
Chromosome Positionchr1:29877521-29879135 | Reverse length=358
E-Value4.1E-97
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9251539991536
Replicate 21.8169875360258
Replicate 32.5696660764915
Condition 2: 8 Hour
Replicate 12.7468117729282
Replicate 24.5151780640855
Replicate 34.3051896984251
Condition 3: 24 Hour
Replicate 13.8263012046174
Replicate 22.1913879025894
Replicate 33.6479507811496


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54888.p1 GENE.R_Transcript_54888~~R_Transcript_54888.p1 ORF type:internal len:312 (+),score=52.32,Myb_CC_LHEQLE|PF14379.2|4.4e-24,Myb_DNA-binding|PF00249.27|1.4e-07 R_Transcript_54888:2-934(+)
GGGGGAAGTATGATAAAGAAAGGAGCAAAGCTAGTCCTTCAAAAACGCATCCTATTCTCCCTTATTTGCATTGCATTTGTGCTTGAATCTTTCTGGTATTCTTCAGTGCTAACTCAGAGAGAGAGAAAGGAGAGAGAGAAAAGAATGTTCCATCCCAAGATGAAACCTTCTTCTATGAATTCAAGTGAAAGGTCTTCTATGTGTGTCCAGAATGACTCTGGCCTTGTTCTCACCACCGACCCCAAGCCTCGTCTCCGTTGGACTGTTGAGCTCCATGAACGTTTCGTCGATGCTGTCACTCAGCTCGGCGGCCCTGATAAAGCAACGCCCAAGACAATCATGAGAGTGATGGGTGTCAAAGGACTTACCTTATATCATTTGAAGAGTCATCTCCAGAAATTCAGGCTAGGCAAACAGCCACATAAGGAATTCAATGACCATGCAGTTAAGGATGCTTCGGGCTTGGACATTCAGAGGAACACTACATCTTCATCAGGATTAATAGGTCGTAGTATTAATGATAATGTGCACATCAGCGATGCAATCACCATGCAGATGGAGGTCCAAAGGAGACTCCAAGAACAATTGGAGGTGCAGAGGCATTTACAGCTGAGGATAGAAGCACAAGGAAAGTACATGCAGAACATTCTAGAAAAAGCCTGCCAAACATTAACAGGTGACCCAAACATGGGAGCCTCAGCAAGCGCAACTGCATACAAAAGCAACAACAGCAACATTTTAGGCAATAACAATAGTATTGCCGATCATCATTTAGGGCTAGGAGCTGGAATGAAGGATCAATTTGGTCCTAATCCCATGAACTTCCCATCTCTCCAAGAATTAAACATCTACGGTCCGGGCGACCAGCCATTGGAAAACTTCCTTCAACTCCAAGGTGGTGGTACTGACAACAATATTTGCTTAGGAAAAAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54888.p1 GENE.R_Transcript_54888~~R_Transcript_54888.p1 ORF type:internal len:312 (+),score=52.32,Myb_CC_LHEQLE|PF14379.2|4.4e-24,Myb_DNA-binding|PF00249.27|1.4e-07 R_Transcript_54888:2-934(+)
GGSMIKKGAKLVLQKRILFSLICIAFVLESFWYSSVLTQRERKEREKRMFHPKMKPSSMNSSERSSMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHAVKDASGLDIQRNTTSSSGLIGRSINDNVHISDAITMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTLTGDPNMGASASATAYKSNNSNILGNNNSIADHHLGLGAGMKDQFGPNPMNFPSLQELNIYGPGDQPLENFLQLQGGGTDNNICLGKK

Click here to download the sequence:
Link to NCBI Protein BLAST