Transcript Information: R_Transcript_54889.p1


Annotated TAIR IDAT1G79430.2
Annotated Gene NameHomeodomain-like superfamily protein
Annotated Gene Symbol(s)APL, WDY
Annotation TypeOrtholog
Chromosome Positionchr1:29877521-29879135 | Reverse length=358
E-Value7.7E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44958031908174
Replicate 20
Replicate 30.22568214380446
Condition 2: 8 Hour
Replicate 10
Replicate 20.66091276377888
Replicate 30.26825040325695
Condition 3: 24 Hour
Replicate 10.90474117153514
Replicate 20
Replicate 30.21564241070835


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54889.p1 GENE.R_Transcript_54889~~R_Transcript_54889.p1 ORF type:5prime_partial len:203 (+),score=26.76,Myb_DNA-binding|PF00249.27|6.7e-08 R_Transcript_54889:2-610(+)
GGGGGAAGTATGATAAAGAAAGGAGCAAAGCTAGTCCTTCAAAAACGCATCCTATTCTCCCTTATTTGCATTGCATTTGTGCTTGAATCTTTCTGGTATTCTTCAGTGCTAACTCAGAGAGAGAGAAAGGAGAGAGAGAAAAGAATGTTCCATCCCAAGATGAAACCTTCTTCTATGAATTCAAGTGAAAGGTCTTCTATGTGTGTCCAGAATGACTCTGGCCTTGTTCTCACCACCGACCCCAAGCCTCGTCTCCGTTGGACTGTTGAGCTCCATGAACGTTTCGTCGATGCTGTCACTCAGCTCGGCGGCCCTGATAAAGCAACGCCCAAGACAATCATGAGAGTGATGGGTGTCAAAGGACTTACCTTATATCATTTGAAGAGTCATCTCCAGAAATTCAGGCTAGGCAAACAGCCACATAAGGAATTCAATGACCATGCAGTTAAGGATGCTTCGGGCTTGGACATTCAGAGGAACACTACATCTTCATCAGGATTAATAGGTCGTAGTATTAATGAGTATGTGTTAACGACATTTCAATTTGCAGAAGTTTTTTTTTTATTCGGTCATTGGAATATAACTTTTCTTCAGGCAACTTCTCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54889.p1 GENE.R_Transcript_54889~~R_Transcript_54889.p1 ORF type:5prime_partial len:203 (+),score=26.76,Myb_DNA-binding|PF00249.27|6.7e-08 R_Transcript_54889:2-610(+)
GGSMIKKGAKLVLQKRILFSLICIAFVLESFWYSSVLTQRERKEREKRMFHPKMKPSSMNSSERSSMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHAVKDASGLDIQRNTTSSSGLIGRSINEYVLTTFQFAEVFFLFGHWNITFLQATSP*

Click here to download the sequence:
Link to NCBI Protein BLAST