Transcript Information: R_Transcript_5489.p1


Annotated TAIR IDAT5G27930.1
Annotated Gene NameProtein phosphatase 2C family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9958199-9960219 | Reverse length=373
E-Value1.5E-179
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.545878171742
Replicate 219.912252296978
Replicate 323.778189569919
Condition 2: 8 Hour
Replicate 19.5814254141394
Replicate 29.6005960079003
Replicate 310.506231147126
Condition 3: 24 Hour
Replicate 120.337622707151
Replicate 212.166352051052
Replicate 322.720389104334


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5489.p1 GENE.R_Transcript_5489~~R_Transcript_5489.p1 ORF type:complete len:368 (+),score=72.29,PP2C|PF00481.17|5e-43 R_Transcript_5489:306-1409(+)
ATGGTGCAATTTTTTTCCCTGATCGAGGGATTGGCAAGGAATGCTTCATCCAAGACCAAAAATGTTAAGAATGATATGGGAAGGGAAACTGCTAAATTTTTGGCAGAAGAAGCAAAGAAGAATCATCTTATCATGAGATGTCCTGGTGTAATGACTGCAAGATGCAAAAGTATCGCATCACTTTTCTCCAAGAAAGGGGAAAAAGGTATTAATCAGGATAGCTTGATTGTGTGGGAGGAGTTTGGGTGCCAACAAGATATGACCTTTTGTGGAATTTTTGATGGGCATGGTCCTTGGGGCCATTTTGTTGCAAAGACAGTGAGGGAATCTATGCCTCCATCATTGTTATGCAACTGGCAAGAGACTCTTGCTCAAATGGCGGTTGACCCAGATTTTGACTTGGACGTGGATAAGAAGTTGCATTGGTTCAATATTTGGAAGCGTTCCTACTTGAAGACGTGTGCTACTATTGATCAAGAACTCGAGAACCATCGCAAAATCGATGCATTCTATAGTGGGACAACTGCTCTCTCGATTGTCAGACAGGGTGAAAAAATCATCATTGCAAACGTTGGTGACTCTCGTGCAGTATTAGCTACTACATCAGATGATGGTGATTTGGTGGCAGTGCAACTTACTATTGATTTTAAGCCCAATCTACCTCAGGAGACTGAGCGAATAACACAATGTAATGGTCGGGTGTTCTGTTTACATGATGAGCCGGGAGTCCATAGGGTGTGGCTGCCAGATGAGGAGCTGCCTGGCCTAGCAATGTCTAGAGCTTTTGGCGATTATTGCATCAAGGATTTTGGCCTTATATCTGTGCCTGAAGTAACACAAAGGAATATTAGCAGCAAAGATCAGTTCATTGTGCTGGCAACTGATGGGGTTTGGGATGTCGTCTCGAATCAAGAGGCAGTGCAGATTGTATCTTCAACTCCAAACCCTGCCAAGTCCGCAAAACGACTAGTGGATCACGCAGTCCGTGCTTGGAAACGGAAGCGACGAGGATATGCAATTGATGATATATCTGCTATTTGCCTGTTTTTCCACTCCCCCTCTATTTCACCTCAGCAAGCTCAACCTGCTACTGTGACCAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5489.p1 GENE.R_Transcript_5489~~R_Transcript_5489.p1 ORF type:complete len:368 (+),score=72.29,PP2C|PF00481.17|5e-43 R_Transcript_5489:306-1409(+)
MVQFFSLIEGLARNASSKTKNVKNDMGRETAKFLAEEAKKNHLIMRCPGVMTARCKSIASLFSKKGEKGINQDSLIVWEEFGCQQDMTFCGIFDGHGPWGHFVAKTVRESMPPSLLCNWQETLAQMAVDPDFDLDVDKKLHWFNIWKRSYLKTCATIDQELENHRKIDAFYSGTTALSIVRQGEKIIIANVGDSRAVLATTSDDGDLVAVQLTIDFKPNLPQETERITQCNGRVFCLHDEPGVHRVWLPDEELPGLAMSRAFGDYCIKDFGLISVPEVTQRNISSKDQFIVLATDGVWDVVSNQEAVQIVSSTPNPAKSAKRLVDHAVRAWKRKRRGYAIDDISAICLFFHSPSISPQQAQPATVTK*

Click here to download the sequence:
Link to NCBI Protein BLAST