Transcript Information: R_Transcript_5490.p1


Annotated TAIR IDAT5G27930.1
Annotated Gene NameProtein phosphatase 2C family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9958199-9960219 | Reverse length=373
E-Value4E-126
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 170.934271027281
Replicate 241.252893771859
Replicate 349.165680694181
Condition 2: 8 Hour
Replicate 16.9675225459641
Replicate 213.27109247485
Replicate 316.921826703017
Condition 3: 24 Hour
Replicate 142.120421390666
Replicate 233.531165955593
Replicate 349.232506477303


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5490.p1 GENE.R_Transcript_5490~~R_Transcript_5490.p1 ORF type:complete len:369 (+),score=84.89,PP2C|PF00481.17|1.9e-39 R_Transcript_5490:306-1412(+)
ATGGTGCAATTTTTTTCCCTGATCGAGGGATTGGCAAGGAATGCTTCATCCAAGACCAAAAATGTTAAGAATGATATGGGAAGGGAAACTGCTAAATTTTTGGCAGAAGAAGCAAAGAAGAATCATCTTATCATGAGATGTCCTGGTGTAATGACTGCAAGATGCAAAAGTATCGCATCACTTTTCTCCAAGAAAGGGGAAAAAGGTATTAATCAGGATAGCTTGATTGTGTGGGAGGAGTTTGGGTGCCAACAAGATATGACCTTTTGTGGAATTTTTGATGGGCATGGTCCTTGGGGTCACTTTGTTTCTAAGTGGGTCAGCAAATTGCTGCCATCATTATTGTTATGTAATTGGCAGAAAATACTTGCTGTTTCTTCTCTTGAAGTAGATCTGGATGAAGAGTTGAGGCAATTGACTAGAGATGCCCAAGAATTTGACATATGGAAGCAGACATATTTGAGAACTTGTGCCACCATTGATCAAGAACTACAACAGCATCCCAGAGTTGACTCCTTTGATAGCGGGACTACTGCTTTGGCAATTGTCAGACAGGGTGAACTTGTCACTGTAGCTAATGTTGGAGATTCTCGGGCTGTCTTGGCTACATTAAATGAAGATGGAAACTTGATACCTGTTCAACTGACTGTTGACTTTAAGCCTGACCTACCTCAGGAAGCAGAAAGGATAGCACTGTCAAGAGGACGAGTATTTTGTTCTCATGATGAACCAGGAGTTTATAGGGTCTGGCAGCCTAATAAGGGAACCCCAGGGCTAGCATTATCACGAGCCTTGGGTGATCATTGCATGAAAGAATTTGGGCTTATTTCTGAGCCTGAAGTGACTCAAAGACACATTACGAATCGTGACCAATTTGCTATATTGGCTACAGATGGGGTGTGGGATGTTGTCTCCAATGAAGAAGCAGTGCAGATTGTATCATCAGCACCATCAAGAGAAAAATCGGCAAAGAGGCTGGTAAAACATGCAGCTCATGCATGGAAATATAAGAGACCTGGTACTGCCATGGATGATATCTCTGCAATCTGCATGTACTTCCACAGTTCTTCACCTTCGAATCAAACTCAAACTGTGTTTAGAGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5490.p1 GENE.R_Transcript_5490~~R_Transcript_5490.p1 ORF type:complete len:369 (+),score=84.89,PP2C|PF00481.17|1.9e-39 R_Transcript_5490:306-1412(+)
MVQFFSLIEGLARNASSKTKNVKNDMGRETAKFLAEEAKKNHLIMRCPGVMTARCKSIASLFSKKGEKGINQDSLIVWEEFGCQQDMTFCGIFDGHGPWGHFVSKWVSKLLPSLLLCNWQKILAVSSLEVDLDEELRQLTRDAQEFDIWKQTYLRTCATIDQELQQHPRVDSFDSGTTALAIVRQGELVTVANVGDSRAVLATLNEDGNLIPVQLTVDFKPDLPQEAERIALSRGRVFCSHDEPGVYRVWQPNKGTPGLALSRALGDHCMKEFGLISEPEVTQRHITNRDQFAILATDGVWDVVSNEEAVQIVSSAPSREKSAKRLVKHAAHAWKYKRPGTAMDDISAICMYFHSSSPSNQTQTVFRA*

Click here to download the sequence:
Link to NCBI Protein BLAST