Transcript Information: R_Transcript_54900.p1


Annotated TAIR IDAT3G19190.1
Annotated Gene Nameautophagy 2
Annotated Gene Symbol(s)ATATG2, ATG2
Annotation TypeOrtholog
Chromosome Positionchr3:6639879-6648274 | Forward length=1839
E-Value2.3E-292
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2957325725269
Replicate 22.5320014809639
Replicate 34.0967594065679
Condition 2: 8 Hour
Replicate 14.128939924676
Replicate 25.3017113818652
Replicate 37.290324960462
Condition 3: 24 Hour
Replicate 15.0326516610552
Replicate 23.1555812413703
Replicate 34.4289887869245


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54900.p1 GENE.R_Transcript_54900~~R_Transcript_54900.p1 ORF type:complete len:1957 (+),score=436.59,ATG_C|PF09333.7|3.5e-26,Chorein_N|PF12624.3|3.2e-10,Chorein_N|PF12624.3|3e+03,Chorein_N|PF12624.3|3.3e+02,Chorein_N|PF12624.3|7.5e+02 R_Transcript_54900:262-6132(+)
ATGTTCCCTTGGAATATCGCAAAGTCGGCGGAAGCGATGGTCTCGCGTTTCGCATTGAAAAGGCTGTGCAAATTCTTGTTGAAGAAGGTGGGCCAATTCATCTTAGGAGAGATCGATCTTGATCAGCTTGATGTTCAGCTTGCTGCTGGCACCGTTCAGCTCTCCGATGTTGCTCTTAATGTCGATTTTCTCAATCGCAAGTTGAGCCAAGAATCGATTTTTGGAGTGCGAGAAGGATCAATTCGCACATTGTTAGTTAAAATGCCTTGGAATGGTGGGGGTTGTGAAGTTGAAGTGGATGAGCTTGAGCTCGTGGTTTTTCCGTTTTGTAATGAAGAGTCCCATAATGTAGCTGGAGAACATGAATCAAATGAAGGTTCTCATGTCTTAGGAAAGGATGAACCTGACATGGTCTACAAAACCTCAGCTTCTTCTGTCAGTGTTCATGAAGGAGTCAAGACCATTGCTAAAATGGTAAAAGGGCTGCTCACGAGCTTCCATATAAAAATAAAAAACGTGATCATTGCGATTGATCCGTGTGTAGATAATGATGAAGAGAAAGAAGGGTCTCACGAAACGTTGGTTCTTAGAGTAACACAAATAGAATGTGGCACTTGCATTTCTGAAGAAAGATACTCAACTGATGGTGCAAAAGCTGATGATTTTCTGGGTTTAAGTCACTTGACGAATTTTCTAAAATTTGAGGGAGCTATTGTTGAGCTTCTTCAGATGAATGGTGAAGACAATGAAACAATTCCTGTATCTGGTCGGGTTGCAGCTTCTTGTTGCTTTCCTTTAAATGCTTCAAAACCACTACTGACTGGGGAGAGAGGTGGTTTTAGTGGCAGCATGAAGCTTTCTATTCCCTGGAAGAATGGTTCTTTGGATGTTCGTAAAGTGGATGCTGAAGTTAATGTAGATCCTTTAACAGCAAAATTACAGCCCAGCACCCTGAAGTGGATCCTAGCCTCCTGGGAAATGCTTCAGAAATACAAAAATGAGAAGGTTGATAATGTCAATCACATGGCTGCAGATACAGTGTTCACTGGTTTGGCACCTCACTCTGAATCATCTGCTATACCTTCTTTGCTGTCTCTTGGGAAACTAAGACAAGAAAAGGAGAGTACAATGGAATTCAGTGTGCCATTGGGTGAAGCAACAGCTGATTTTCTTCTCAAAGAGTCACATCTCATATCGGATTGGGTGCCTTTTTCTGCTGGGAGATGTCAGAATGAGGGAATAGAAGATGCTAATTTAGGAGCCAGTGTAGATCAGTTTTTTGAATGTTTTGATGGGATGAGGAGTTCTCAGTCAGTGTTGGGCAACAGTGGAATGTGGGGCTGGACAAGCTCTGTTTTCAGTGCAATATCTGCTGCATCAAATCTGGCTTCGGGATCAATGATAATTTCTTCAGAACAACAACATGTGCAAACTAATCTCAACGTAAAGCTTGCTGGAGTTTCAATGATTTTTTCCTTCATGGATGAAGATCGTCTGACTTTGAAATGTCCAGCTGATAAGCACGTTGATTCTGATTCAAATGTTCGTCATCTGGGGTCAATATGGAAAGACATTCTAATTGCGGTGAAGGTCTATCCTCAAGAATGGAAATTAGAAGCAACGGTCAAACATATTATTTTGGATGATTACTTATGTCAGAAAGAGGATGTTGAAGATATCAGTTTGTATGATCATGAGGGTGTTAGTAGTCAGGCACTTGCTATCCAAGGTTTGCAAGAGAAGGTTCAAAGTGCTCTTCCTTCAACTTCTGTGTTCACTGGTACATCAAATGCAGATGTTTCAGATGCATGTAAGATTTTGGAGGCTTCTTTGTTTAGTGCAGGAACCTGTGGGTGCAGGAGCAATGTGGTCAAAGCCCATGTGTTTGAGACCTATGGTGCTAGTCACTTCATGTATGAAGTGAGTTCAAAGTCCTCCAATGGCCGACATACAGGGCAGGCATCTTTTTCATTGGCGCTTCCACCATTCATGTTTTGGTTGAACTTTGATTTGGTAAAGATTGTCTTAGATTTTTCAAGGGAATCTGGATGTGCTTCTGGAAAGCATGTTATGGGGACTGATTTTTCATCTGGAGCCTCTAAAGAGAAACATGACTCTTCGACTTGTTGTGATGTAACCTGGAACTCTCATCAGCGTACTACATCTACATCCCAAAAAGGAAGCTTGCAAGGAAATATATTTCTTCCTTGTGCTAGAACAATTTTATGCTTTCCTTTAAAGAATGTTGGAGGTTTTGAAAGTTATGCCTCCTGTGATCAAATTATTGCTCTTGATTTTTGTTTGCCAGCAAGTTTCAAGAAAGCAAAGGCTGAAGGATCTGTTCTGGATCAGGAAGGGATTTCATGGAGGAAAGATTTTTCTTCAACTTCCCATGCAGTGTCTCTAAAAATTGCTGAACTTGATGTTTACCATGTCACAAAGGCTGCTGAACATAATTGTAGCAGCTCTGATGAGATGTCAAGGCAGATATTTTTTGCTCACAAAATCATGTCTCTTGGAAATGCAACTGATTGGACTCGTATTGTTAGTATGCTTTGGCATGAAAATGCAATAACTGGTGCTTGTATTGTGAAGACTGCGAAGCTTTTAGCAACTTCAGGTGATCCAGCAAGTAAAAGGTCGTCTGCAGCAAGTAATTATGAATTTGCCTCTGTATCTACCAAGAGCGATACGGATAATCTATCTTCCAAGAAACAGGAGATCATTTTGAGCTCCAAATTCTGTCTTCATGTTTGTCTATCATCTGTTAAAGTTATGCTCTTTAGGTCTCAGTATTTACGTTTGTTTAGCCTTCTGAATGAGGTTATGGATGCATTAACCTGTGTTGGTAGTGATGCATCTTGTGGATGTCAAAATATGACTGTCAACCAAACATCAATCTATCTCCAATGTGGTGGTGTTATGGAAGTTCAAGTAGAACTGGACCCAGAAGATTGTCCTAAAAGCTCATTGCAGAGAGAGCTTCCTTGGTCGTGGCACAAGCTACGGCTGGAAATTCAAGATTTTCAGTTGCTTTCTGTTGCTGATCTTGGGGCTGTTAGTGGTGCACGTTTTCTTTGGATATCCCATTGTGAAGGGAAATTGTGGGGTTCTGTCTCTATGTTGGCAGATCAAGATCTTCTTCTGATCTCATGTAGCAATACCTCAAGCGGACGCGGAGATGGAGAAGGTTCGAATGTTTTATCTTGCAGGCCTGCTGGGTCTGATTTTGTGCACATGTGGGATCCACAGAATTCCCATTCTTTTATGTCAATAACTGTGAAATGTGCGACTATAGTTGCACCAGGCGGCCGAATAGATTGGCTGGATAAGATATCCTCTTTTTTCAGCTTGCCATCTCCTGAAATAGGCAAGGAAACTGACTTGCAGAAAGGGGATTTCCAAAAGACTTCCTTTGTTCTGAAATTCATAGATGCTGCATTGAGTTATGAGCCCTACTCCAGAAATTTAGAATGTCAGAATTCCAAGTCTGATTGTTCTGCTGGCTTCAGTGAAAAACCATGTGCCCCTTTTGTTGCGTGTCTGCTTGCTGCATCATGTTTGACAATTTCTAATACATCAACAGCGGGTGCTTTTAAGAATGATTACAGTATCAGATTTCGAGATGTTGGGTTTCTTCTTCATGCAGTCCCAGAGCATGAAAGTATCTTGCTTGACTATAGTGTTAATCATCTACGTGAACTTGGCTATGTCAAAGTTGTCGAGGAGGCCCTTGTTAAGGCAACTCTGAGGGTGGACTGTGAAAATGACAATTCCTGGGAGTTGTCTTGTTCCGAATGTCATTTTGTTCTTCGCACATGCCATGATACAGCATTTGGGCTTATACGCTTGGCCTCTCAAATCCAGCAGCTGTTTGCCCCTGATATAGAGGAGTCAATTGTACATTTGCAGAACCGATGGAATTCTGTACAGCAGGCTCAAGAAAAGGATGATTCCTTAGGAGAACTGGAAACTAGCAGCAAGTGTTCCTCAGAAACATCTCAGGTACTTCAAGAAAGTGTTGATTCAAAGGGTAAATCTGGGCCTGTTGGCTTAATGGATGACATACGTGAAGATGCCTTCCTGTTATGTGGTAAAGGTGTAAGCTCATTTGATGGAAAGCTTGATCATGAGGGGTCTAGCTTCACTGCTACATGTTCTGGGAAAAGTTTGGAAGGCTTCCAGACCTCAAATTTACAGAAGGCAGAGCTTATAGAAGGCTATCTATCAGGTTTAAAATCCTTGTCAGAGCTAACAGTCAACAGCAATTTTACTACCGACATCTCTAAATCAAAATCAGCTAGCAGGGAAAATGGTGATTTTCAAAGAGGAGACACTGGATGGTATGGAACATCAGTTGCAATAGTTGAAAACTATGTTTCATATGATAGTGTTTGCTCTAGTTCAAGGCATCTTATGGATGGCCAGCAAAATAAGGAAGCATGTGATGGTTCCAAAAGATACAAAGGACGCTTACTTTTAGAAAATATAGTAGTGAAATGGCAGATGTATGCTGGTTCTGACTGGCAAGAGTTAGGGAAAGCTGTAGAACATTCTGGAGACATACGTGGAAGGGATGAAACTGTATGTCTTGAGCTTGCACTATCAAATATCAACGTTCAGTACGACATCTTTCCAGATGGGGACGTTTGTGTATCTAAACTTTGTCTTTCAGTTGAAGATTTTTTCCTTTATGACAGAAGCAGAAATGCGCCATGGAAACTGGTACTTGGATATTATCATTCGAAGGAACGACCAAGAGGATCTTCTTCAAAGGCACTCAAACTCAACTTAGAAGCCGTCAGACCAGATTCTACAATTCCCCTTGAGGAGTATCGGTTATGTATCGCATTCCTTCCAATGGTATTGCATCTTCATCAGAGCCAGCTGGATTTCCTTATTGCCTTCTTTGGGGGTGGAAACTCACCAGATGATCTGTCACAAAGCAGCCCGCAAGAATCAGGTTCACCAGATGTGATCTCAGTGAAAGAGAATAATTCAAAAGTTACTTGCATTGCTGATGAGGCGTTGCTTCCATTTTTCCAGAAGTTTGACATCTGGCCTAGTGTTGTTCGAGTTGACTACCGTCCTAGCCGGGTTGATCTTGCTGCATTGGGCAGGGGAAAGTATGTGGAACTAGTAAACCTGGTTCCATGGAAGGGAGTTGAGTTACAACTCAAGCATGTTCAAGCTGTTGGTGTTTATGGCTGGAGCAATGTATTTGAAACAATGATTGGGGAATGGCTAGAAGATATTTCTCATAATCAGATTCATAAACTACTGCGAGGTCTTCCTACCATTAGATCATTTGTTGCTGTTGGCTCTGGTGCTGCAAAGTTGGTTTCTCTACCGGTAAAGAATTATAAGGATGACAGAGTAGTGAAGGGTTTACAAAGAGGCACTGTAGCATTCCTCAGAAGTATCTCAATTGAAGCTCTTGGACTTGGTGTGCATTTGGCAGCTGAAGCTCATGAGATTCTGCTTCATGCTGAATGTATTCTTGCACATATTCAGCCTTCTGTACCTAGACCCATCAGAAGCAACTCAAGGACTAACCTTAGAGCTGACCAGCCAGAAAATGCCCAGCGTGGGCTTCAACAGGCTTATCAGAGTCTTAGTGATGGTGTGGGGAAGACTACGGCTGCATTGGTTCGTACTCCCGTGAAAGCATATCAGCGTGGTAGTGGCGTTGGTTCTGCTGTTGTGACCGCAATCAGGGGGGCTCCAGCTGCCGTCATAGCTCCTGCTTCTGCTGCTGCACAAGCTCTACACTGTGCTCTTCTCGGTGTCCGAAACAGCCTTGATCCGGAGCATAAAAAGGAGTCTATGAACAAGTACTTGGGCCCTTCTCACTCCTGGAAGCAAAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54900.p1 GENE.R_Transcript_54900~~R_Transcript_54900.p1 ORF type:complete len:1957 (+),score=436.59,ATG_C|PF09333.7|3.5e-26,Chorein_N|PF12624.3|3.2e-10,Chorein_N|PF12624.3|3e+03,Chorein_N|PF12624.3|3.3e+02,Chorein_N|PF12624.3|7.5e+02 R_Transcript_54900:262-6132(+)
MFPWNIAKSAEAMVSRFALKRLCKFLLKKVGQFILGEIDLDQLDVQLAAGTVQLSDVALNVDFLNRKLSQESIFGVREGSIRTLLVKMPWNGGGCEVEVDELELVVFPFCNEESHNVAGEHESNEGSHVLGKDEPDMVYKTSASSVSVHEGVKTIAKMVKGLLTSFHIKIKNVIIAIDPCVDNDEEKEGSHETLVLRVTQIECGTCISEERYSTDGAKADDFLGLSHLTNFLKFEGAIVELLQMNGEDNETIPVSGRVAASCCFPLNASKPLLTGERGGFSGSMKLSIPWKNGSLDVRKVDAEVNVDPLTAKLQPSTLKWILASWEMLQKYKNEKVDNVNHMAADTVFTGLAPHSESSAIPSLLSLGKLRQEKESTMEFSVPLGEATADFLLKESHLISDWVPFSAGRCQNEGIEDANLGASVDQFFECFDGMRSSQSVLGNSGMWGWTSSVFSAISAASNLASGSMIISSEQQHVQTNLNVKLAGVSMIFSFMDEDRLTLKCPADKHVDSDSNVRHLGSIWKDILIAVKVYPQEWKLEATVKHIILDDYLCQKEDVEDISLYDHEGVSSQALAIQGLQEKVQSALPSTSVFTGTSNADVSDACKILEASLFSAGTCGCRSNVVKAHVFETYGASHFMYEVSSKSSNGRHTGQASFSLALPPFMFWLNFDLVKIVLDFSRESGCASGKHVMGTDFSSGASKEKHDSSTCCDVTWNSHQRTTSTSQKGSLQGNIFLPCARTILCFPLKNVGGFESYASCDQIIALDFCLPASFKKAKAEGSVLDQEGISWRKDFSSTSHAVSLKIAELDVYHVTKAAEHNCSSSDEMSRQIFFAHKIMSLGNATDWTRIVSMLWHENAITGACIVKTAKLLATSGDPASKRSSAASNYEFASVSTKSDTDNLSSKKQEIILSSKFCLHVCLSSVKVMLFRSQYLRLFSLLNEVMDALTCVGSDASCGCQNMTVNQTSIYLQCGGVMEVQVELDPEDCPKSSLQRELPWSWHKLRLEIQDFQLLSVADLGAVSGARFLWISHCEGKLWGSVSMLADQDLLLISCSNTSSGRGDGEGSNVLSCRPAGSDFVHMWDPQNSHSFMSITVKCATIVAPGGRIDWLDKISSFFSLPSPEIGKETDLQKGDFQKTSFVLKFIDAALSYEPYSRNLECQNSKSDCSAGFSEKPCAPFVACLLAASCLTISNTSTAGAFKNDYSIRFRDVGFLLHAVPEHESILLDYSVNHLRELGYVKVVEEALVKATLRVDCENDNSWELSCSECHFVLRTCHDTAFGLIRLASQIQQLFAPDIEESIVHLQNRWNSVQQAQEKDDSLGELETSSKCSSETSQVLQESVDSKGKSGPVGLMDDIREDAFLLCGKGVSSFDGKLDHEGSSFTATCSGKSLEGFQTSNLQKAELIEGYLSGLKSLSELTVNSNFTTDISKSKSASRENGDFQRGDTGWYGTSVAIVENYVSYDSVCSSSRHLMDGQQNKEACDGSKRYKGRLLLENIVVKWQMYAGSDWQELGKAVEHSGDIRGRDETVCLELALSNINVQYDIFPDGDVCVSKLCLSVEDFFLYDRSRNAPWKLVLGYYHSKERPRGSSSKALKLNLEAVRPDSTIPLEEYRLCIAFLPMVLHLHQSQLDFLIAFFGGGNSPDDLSQSSPQESGSPDVISVKENNSKVTCIADEALLPFFQKFDIWPSVVRVDYRPSRVDLAALGRGKYVELVNLVPWKGVELQLKHVQAVGVYGWSNVFETMIGEWLEDISHNQIHKLLRGLPTIRSFVAVGSGAAKLVSLPVKNYKDDRVVKGLQRGTVAFLRSISIEALGLGVHLAAEAHEILLHAECILAHIQPSVPRPIRSNSRTNLRADQPENAQRGLQQAYQSLSDGVGKTTAALVRTPVKAYQRGSGVGSAVVTAIRGAPAAVIAPASAAAQALHCALLGVRNSLDPEHKKESMNKYLGPSHSWKQS*

Click here to download the sequence:
Link to NCBI Protein BLAST