Transcript Information: R_Transcript_54928.p1


Annotated TAIR IDAT2G27060.1
Annotated Gene NameLeucine-rich repeat protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11551288-11554577 | Forward length=1020
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0641358375741
Replicate 22.9731089456672
Replicate 33.6239174712663
Condition 2: 8 Hour
Replicate 13.2042049833309
Replicate 22.3802110553606
Replicate 32.9248200706678
Condition 3: 24 Hour
Replicate 14.5287861914026
Replicate 23.7692092830576
Replicate 34.0825699171849


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54928.p1 GENE.R_Transcript_54928~~R_Transcript_54928.p1 ORF type:complete len:1024 (+),score=177.33,Pkinase_Tyr|PF07714.13|2.1e-25,Pkinase|PF00069.21|4.1e-21,LRR_8|PF13855.2|0.074,LRR_8|PF13855.2|0.033,LRR_8|PF13855.2|0.00064,LRR_8|PF13855.2|0.2,LRR_8|PF13855.2|3.4,LRR_8|PF13855.2|0.0059,LRR_8|PF13855.2|34,LRR_8|PF13855.2|0.00017,LRR_8|PF13855.2|0.00054,LRR_8|PF13855.2|35,LRR_4|PF12799.3|0.0087,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|2.8e+02,LRR_4|PF12799.3|0.13,LRR_4|PF12799.3|0.81,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|35,LRR_4|PF12799.3|1.6e+03,LRR_4|PF12799.3|0.53,LRR_4|PF12799.3|0.31,LRR_4|PF12799.3|0.0073,LRR_4|PF12799.3|3.6e+02,LRR_1|PF00560.29|9.4e+02,LRR_1|PF00560.29|1.3,LRR_1|PF00560.29|6.8e+03,LRR_1|PF00560.29|1.6e+03,LRR_1|PF00560.29|3.5e+02,LRR_1|PF00560.29|6.4e+02,LRR_1|PF00560.29|23,LRR_1|PF00560.29|3.3e+02,LRR_1|PF00560.29|3.1e+03,LRR_1|PF00560.29|77,LRR_1|PF00560.29|3.9e+02,LRR_1|PF00560.29|2.1,LRR_1|PF00560.29|11,LRR_1|PF00560.29|7.8 R_Transcript_54928:620-3691(+)
ATGCAGTCAATCTGGTTGATAGTAGTACTAGTACTATTCTTGTTTGTGAAACTTGCATTTGGGGGGAGTTCAGATTTTAGTGCTCTTTTGGAGTTAAAGAAAGGGATTACAAAGGATCCTTTTGGTATACTTGATGACTCTTGGAATGCTAAATCATTAGCTTCAGATGGGTGCCCTAAGAATTGGCATGGAATTGGTTGTACAGATGGTAGTGTAGAATCAATAATGCTGAATGATGCTGGTTTGGTTGGAGTGTTTGATTTCAAGGCCATTAGTAGCCTTAAAATGCTCAGGAACATATCCATTTCAAATAACCAACTATCTGGGAGTATCTTGGAGATTTCTCACTTTGAGTCTCTTGAAGTTTTGGACCTTTCCCAAAATTTGTTTCATGGGAAATTTCCCTCTGACTTCACTAATCTGAAGAATTTAGTGTCCGTAAATTTCTCAACAAACAACTTTGAGGGTGAACTTCCCTTAGGATTTCGTAAGTTGAGCAAACTGATGTACCTTGACTTGCATTCCAATACGTTTTCTGGGGACATTATGTCTCTTATCTCGGAACTAGCGGGTGTGGTTGAGGTTGATTTAAGCTGCAACAACTTTGGTGGGAACTTGGATATTGGACTTGGAACCACTAGTTTCGTGTCGAATATCAGGTATTTGAATGTCAGTCATAACGCCTTGGTTGGGGAGCTCTTCTCTCATGATGGAGTGCCATTTTTCGACAGCCTTGAGGTGTTTGATGCTAGTAATAATCAGCTCAATGGTAGCATTCCGCCCTTCAATCTTGTTGTCTCTCTTCGTGTTCTTCGGCTAGGAAATAATCAGTTAACAGGGGCTCTGCCAGAGGCAATATTGCAAGACAGTTCAATGGTGTTGTCTGAACTGGACCTCAGCTGCAACCAGCTTGATGGGCCAGTGGGAAGTGTCACATCTACAAGCTTGAGAACTTTAAATCTATCTTCAAATCAGTTGTCAGGCTCCTTGCCGTTGAGGATAGGACATTGTTCCATCATAGATTTGAGCAACAATAACATTTCGGGGAATGTTTCAAGAGTTCAGTCTTGGGGGAATAATGTGGAAGTGATTCAGCTGAGTTCAAACACTTTGACTGGCAGATTGTCTAATGAAACCCCACAGTTTCTGAGACTGAATTCTTTCAGGATATCTAATAACTCGGTGGAAGGAACTATCCCACCTGTCCTTGGAACATACCCTGAGCTTAAAGTAATTGATCTTAGCTCTAATCAGATGAGTGGATTCCTCCTTCCAAGCTTGTTCAATTCAACAAAATTAAGTGATCTTAACCTGTCAAGCAACAACTTCAGTGGGACTGTTCCTCTTGTAGCGGCTGTAGGTCCTTTTTCTTTTGGCACCTCATACAATTTCAGCCTAATTTCATTGGATTTATCTCATAATTCACTGACTGGAGATATTCCAGTTGAAATAAGCAAGTACCACAACTTACTGTATCTTGACCTCTCGAGCAACAACTTTGGAGGTACCATCCCGGGTAATCTTTCAGACCTGCTCATCAGTCTGAACATTTCTCACAACAATCTTTCAGGAAGTGTGCCTGAGAACCTGAGGAAGTTTCCTGATTCAGCATTTCATCCGGGAAATCCACTACTGATCCCATTTTCCTCATCACATCAAAGTACCTCAGGCATGAACTCAAGGAGGCATCACCGCTTCCAGCGCACTGTTATTGCTTTCGTTCTGGCTGGTTTGATTGGTGCAGCAATAGTTGTGGTTCTTCTGTTCCTGATAATCTATTATCGTGTCCACACAAAGAGGCATTCTTCTGGAAAGGATTTTATAGAGACAAATGAAAGCAAGGAATATAAAAGTGGGACTTCTTCACTCCCTAGTACATCTCCCTCGCACAAAAGTATGGATCCATCTTTAACAACTCCAAGTTCTGGCCCAGGAGTTTTCACTTCATCAAAGTTGGGCTCAACCCCCGAGCTTGGAGACTCTTCATCAGTGGTGACAAAGCACAAGGATGTTAACTCTCCTGAATCCCTCAGGAAAGATGGTGAAATATCTTTAGTTCCCGTCACCTCAACTTCAAACCCATCACCTCCTAAAAGACAAAATTTACTCAGGAATTTGGGTGCAGTCAAGATTGGTTCGACAGATAAACTTTCCGGGGATTTACATCTGTTTGATGGGTCATTGGTTTTCAGTGCAGAGCAGCTGTCACATGCTCCAGCAGAAGTTATTGGAAGGAGTTGTCATGGAACTCTCTATAGAGCTGCACTTGAAAGTGGTCATATATTGGTCGTCAAAAGGTTGAAAGAGGGAATAGCAAAAGGAAAAAAGGAATTTGCACGAGAAGCTAAAAAGCTTGGAAATGTTAGACATCCAAACCTAGTATCCATCCAGGGATATTACTGGGGCCCAAGGGAGCATGAGAAGCTGATTATATCTAGCTACATTAATGCTCCATGCTTAGGCATATATTTACAAGGGCCAGAGCAAAGTCAAGTCCCACCCTTGTCCCTAGAAAAGCGGCTCAAAGCTGCTAGAGATGTCGCGATGTGTTTGGATTTTCTGCATAATGAGAAAGCCATGCCTCATGGAAACCTCAAGTCTACAAACATCCTAATACATCCATCAGAGCCAAATGTTCTGGTCACCGACTATAGTCTTCACCGGATTCTGACACCTGCTGGCACAGCCGACCAGGTCATAAACGCCAGTGCTCTCGGTTACTTGCCACCCGAATTCATCAACTCGAGCAAACCATGCCCATCTTTGAAGAGTGACATTTACGCTTTTGGTGTGATTTTGCTGGAGCTTCTAACCGGAAGGAGCTCAGCTGAGATCGTTTCTGCGAACCAAGGTGCTGTCGACTTGACTGACTGGGTGAAAATGTTGGTGGGGGAAAACCGAGCAAGAGACTGTTTCGACAAGGCAGGATTAGGTGCTAATTTGACCGAAAATGGATACACAGCATTAGACATGATGTTAGAGGTTGCTCTAAGATGCATTCTCCCAGCATCTGAGAGACCTGACATGAGAACAATCTTGGATGATCTTTCATCAATACAACTACAGAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54928.p1 GENE.R_Transcript_54928~~R_Transcript_54928.p1 ORF type:complete len:1024 (+),score=177.33,Pkinase_Tyr|PF07714.13|2.1e-25,Pkinase|PF00069.21|4.1e-21,LRR_8|PF13855.2|0.074,LRR_8|PF13855.2|0.033,LRR_8|PF13855.2|0.00064,LRR_8|PF13855.2|0.2,LRR_8|PF13855.2|3.4,LRR_8|PF13855.2|0.0059,LRR_8|PF13855.2|34,LRR_8|PF13855.2|0.00017,LRR_8|PF13855.2|0.00054,LRR_8|PF13855.2|35,LRR_4|PF12799.3|0.0087,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|2.8e+02,LRR_4|PF12799.3|0.13,LRR_4|PF12799.3|0.81,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|35,LRR_4|PF12799.3|1.6e+03,LRR_4|PF12799.3|0.53,LRR_4|PF12799.3|0.31,LRR_4|PF12799.3|0.0073,LRR_4|PF12799.3|3.6e+02,LRR_1|PF00560.29|9.4e+02,LRR_1|PF00560.29|1.3,LRR_1|PF00560.29|6.8e+03,LRR_1|PF00560.29|1.6e+03,LRR_1|PF00560.29|3.5e+02,LRR_1|PF00560.29|6.4e+02,LRR_1|PF00560.29|23,LRR_1|PF00560.29|3.3e+02,LRR_1|PF00560.29|3.1e+03,LRR_1|PF00560.29|77,LRR_1|PF00560.29|3.9e+02,LRR_1|PF00560.29|2.1,LRR_1|PF00560.29|11,LRR_1|PF00560.29|7.8 R_Transcript_54928:620-3691(+)
MQSIWLIVVLVLFLFVKLAFGGSSDFSALLELKKGITKDPFGILDDSWNAKSLASDGCPKNWHGIGCTDGSVESIMLNDAGLVGVFDFKAISSLKMLRNISISNNQLSGSILEISHFESLEVLDLSQNLFHGKFPSDFTNLKNLVSVNFSTNNFEGELPLGFRKLSKLMYLDLHSNTFSGDIMSLISELAGVVEVDLSCNNFGGNLDIGLGTTSFVSNIRYLNVSHNALVGELFSHDGVPFFDSLEVFDASNNQLNGSIPPFNLVVSLRVLRLGNNQLTGALPEAILQDSSMVLSELDLSCNQLDGPVGSVTSTSLRTLNLSSNQLSGSLPLRIGHCSIIDLSNNNISGNVSRVQSWGNNVEVIQLSSNTLTGRLSNETPQFLRLNSFRISNNSVEGTIPPVLGTYPELKVIDLSSNQMSGFLLPSLFNSTKLSDLNLSSNNFSGTVPLVAAVGPFSFGTSYNFSLISLDLSHNSLTGDIPVEISKYHNLLYLDLSSNNFGGTIPGNLSDLLISLNISHNNLSGSVPENLRKFPDSAFHPGNPLLIPFSSSHQSTSGMNSRRHHRFQRTVIAFVLAGLIGAAIVVVLLFLIIYYRVHTKRHSSGKDFIETNESKEYKSGTSSLPSTSPSHKSMDPSLTTPSSGPGVFTSSKLGSTPELGDSSSVVTKHKDVNSPESLRKDGEISLVPVTSTSNPSPPKRQNLLRNLGAVKIGSTDKLSGDLHLFDGSLVFSAEQLSHAPAEVIGRSCHGTLYRAALESGHILVVKRLKEGIAKGKKEFAREAKKLGNVRHPNLVSIQGYYWGPREHEKLIISSYINAPCLGIYLQGPEQSQVPPLSLEKRLKAARDVAMCLDFLHNEKAMPHGNLKSTNILIHPSEPNVLVTDYSLHRILTPAGTADQVINASALGYLPPEFINSSKPCPSLKSDIYAFGVILLELLTGRSSAEIVSANQGAVDLTDWVKMLVGENRARDCFDKAGLGANLTENGYTALDMMLEVALRCILPASERPDMRTILDDLSSIQLQN*

Click here to download the sequence:
Link to NCBI Protein BLAST