Transcript Information: R_Transcript_55016.p1


Annotated TAIR IDAT5G03700.1
Annotated Gene NameD-mannose binding lectin protein with Apple-like carbohydrate-binding domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:965874-967322 | Reverse length=482
E-Value2.9E-172
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.281313234965
Replicate 28.4244415250579
Replicate 38.2483108628121
Condition 2: 8 Hour
Replicate 111.587960777503
Replicate 217.943917526877
Replicate 317.852818676019
Condition 3: 24 Hour
Replicate 111.526141900329
Replicate 29.2123817999736
Replicate 310.673633767067


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55016.p1 GENE.R_Transcript_55016~~R_Transcript_55016.p1 ORF type:complete len:486 (+),score=51.04,B_lectin|PF01453.20|3.2e-09,B_lectin|PF01453.20|5.3e+02 R_Transcript_55016:285-1742(+)
ATGAAGAACCACATTCATGTCCTTTTCCCTTCTCTTTTTTTCTTCTTGCTTATAGTAGTCAGTCAATCAACGGCTGAAATTCCTCGAGAGCTCCTTAAAGGATTCACTGCTACTCCAAATCCAACGGTCACAGATTCCCAGCCCATCCTCAGTGATTCAACTCGCAACTTTTCACTGAGTTTGCTCCGAGTCAACCAGCACCAACTTACCCTTGCCATAATTCACGTGCCTTCCGGCGTGGCCCTCTGGCAGGCCAACCTGGCCCGTCAGGCCCAATGGGGAAAGCCCACCAAGGTTCTCTTCAATGGCAGTCTTGTGATTATGGACTCTAGTTCAGGGGTATTATGGTCTACAAATACTGATGGTGATAAAGTTGTCCTCACTAATGATCCTGATCTTCAAATTTTTAAGGGAAATGAGCATGTGTGGCAAAGTTTTGAGTTTCCAGCAAATACCCTTGTGGAAAACCAAAATTTCACTTCTGCCATGAAGCTTGTTTCTTCTAATGGGCTCTATACGATGCGTTTAGGCTCCGATTTTATTGGCTTGTATGCTAAGTTCAACCCTGTAGGTTCGGGTATGGGTCAGATATATTATAAACACGGAGCCTTGGAGGCCAAGGTCGATATAATTGATGGAAAGGGTCCAATTTTGATTCGGATCAGCTCAGATGGGTTCCTAGGAATGTACCAAACCGGGTCTGTCCCAGCTGATGTGCAATCGTTTAATAGTTACCAAAGGTCCGTGCCCGGACCTAGGCGGATCACACTCGAGTCCGACGGCAATTTAAAAGGTTACTATTGGTCAGGTACAGGTTGGGTTGTCGACTATGTGGCAATATCCGATATTTGCCAATTACCGAGCCCATGTGGGCCATACGGGCTATGCCGACCTGGAAACGGGTGCTCATGTTTGGATAACCAAACCCACACCCAAACCGGGGAGTGCCTCCGATCCGGATCCGAACCTGGGGACTGGTGTGGGGAAAAAGCGCAGGACAAGTATAAGGTAATCAAGAGAACAGCTGTTGAGCTACCATTCAAGGAATTGATGGGGTACACCAATACGGCGTCGTATGAGCAGTGTGAGAAGTCATGTGAAATTAACTGTACATGCTGGGGAGTAGTGTACAACAATGCGTCAGGATTTTGTTACACTTTGGATTATCCAATACAAACAATCCTAGGGGTTGGAGATGAGACCAAATTGGGTTATTTTAAGGTGTGGGAAGGTGCACGGAAGAAGGTGGGAATGGGATTAGGGGTTGGAATTGGAGTACTTTGTGGGGCTATTTTGGCACTTGTAGGGGTGCTTGGTTTTGGAGGTTACAAATTATGGAAGAGAAAAAGAAGGGTGAACAATAATAGGTTCTTGGAAGAAGAGGACATTGTTTGTCCTGGGCCCTACAAAGATTTGGGGTCTGAGAGTTTTGGGTCAGTTGAACTTACCAATAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55016.p1 GENE.R_Transcript_55016~~R_Transcript_55016.p1 ORF type:complete len:486 (+),score=51.04,B_lectin|PF01453.20|3.2e-09,B_lectin|PF01453.20|5.3e+02 R_Transcript_55016:285-1742(+)
MKNHIHVLFPSLFFFLLIVVSQSTAEIPRELLKGFTATPNPTVTDSQPILSDSTRNFSLSLLRVNQHQLTLAIIHVPSGVALWQANLARQAQWGKPTKVLFNGSLVIMDSSSGVLWSTNTDGDKVVLTNDPDLQIFKGNEHVWQSFEFPANTLVENQNFTSAMKLVSSNGLYTMRLGSDFIGLYAKFNPVGSGMGQIYYKHGALEAKVDIIDGKGPILIRISSDGFLGMYQTGSVPADVQSFNSYQRSVPGPRRITLESDGNLKGYYWSGTGWVVDYVAISDICQLPSPCGPYGLCRPGNGCSCLDNQTHTQTGECLRSGSEPGDWCGEKAQDKYKVIKRTAVELPFKELMGYTNTASYEQCEKSCEINCTCWGVVYNNASGFCYTLDYPIQTILGVGDETKLGYFKVWEGARKKVGMGLGVGIGVLCGAILALVGVLGFGGYKLWKRKRRVNNNRFLEEEDIVCPGPYKDLGSESFGSVELTNR*

Click here to download the sequence:
Link to NCBI Protein BLAST