Transcript Information: R_Transcript_5502.p1


Annotated TAIR IDAT5G49610.1
Annotated Gene NameF-box family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20131448-20132527 | Reverse length=359
E-Value1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.245096761909
Replicate 217.980571630217
Replicate 322.348036679173
Condition 2: 8 Hour
Replicate 120.371708777247
Replicate 228.238945631416
Replicate 326.809289398675
Condition 3: 24 Hour
Replicate 121.900130471956
Replicate 222.174799589171
Replicate 323.370611508503


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5502.p1 GENE.R_Transcript_5502~~R_Transcript_5502.p1 ORF type:complete len:369 (+),score=72.46 R_Transcript_5502:195-1301(+)
ATGGACAAGGGAAAGAAGCTGGTGAAATCTGGAGCCAGAAACAAGTCCAACAAGATTTACATGGACCTGGGTGAGATAATAAGGGAGCAGGCACTCCGATATCTCCCTGCAAAGTCTCTTCACAGGTTCACTTGTGTTTGCAGGGACTGGAAACTTCAGATATCAACCCCATTCTTTGTGCACAACCAATCTTGCTCGTTTCGTTCAACCTCAGGCCTCTTTTGTCAGCGACCTGGTGGCACTCCATCCTTTATTTCCCTTGACCCGTTGTTTTATGGTGTGCCAGATCCTGAACTCAAGTTTTTGCCTGAGCCAGTTGATGTGCATGCCTCTTCTAATGGATTGCTCTGCTGTAGAGGTCGTACTGGGGACAAGGCATATTACATTTGTAACCCTGTTAACCAGCAGTGGAAAAAGCTTCCCAAGCCTGAAGCTAACCATGGATCTGATCCTGCCCTTGTACTCATCTTTGAGCCATCACTGCTGAACTTTGTGGCTGATTTCAAGTTGGTCTGTGCTATCCCTTCTCCTGATTTTGATGATGCTTATGAATTTGAAATCTATTCATCGATAGAAAACTCATGGAAGATTTCTTCTGAGATTTGCTTTGGTGACCGTGGAAGGATCTTGCGGAAGGGAGGTGTTCATGTCAACGGGGTTGTTTATTGGCTGTCAAACCGTTTTTCACTTGTTGCCTTTGATCTTAAGAAAGAACGTTCAACAGTTATCCCTTGCTATGAAATACATGGAGCATATGCCTTGGGTGTCATGAATGGGCAGCTTTGTGCATCACACAAGAAAGGCACAGAACTAACAGTCTTCGTGCTGTCCAATATTTATGCAAATGCCATGCATATGCGAGCTGCATCCAAGACTTGGAAAAGATTCATATCAGTTCATATAAATAATGCGGATATCAAAGCAATGGTGAATGGATATGAGCAAAATGTTTTTGCAACTGAGAGTGATGCAATTGTGTTTCATGATGGACGACGGATCTTTTCCTACAACCTGAGCACCAAAGAAACCAAAATGCTGTGCACCGATGCAGAATTTGGCCGGAGCTCTGTTTATGTTTCGTATGTTAACAGCCTTGTGAGTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5502.p1 GENE.R_Transcript_5502~~R_Transcript_5502.p1 ORF type:complete len:369 (+),score=72.46 R_Transcript_5502:195-1301(+)
MDKGKKLVKSGARNKSNKIYMDLGEIIREQALRYLPAKSLHRFTCVCRDWKLQISTPFFVHNQSCSFRSTSGLFCQRPGGTPSFISLDPLFYGVPDPELKFLPEPVDVHASSNGLLCCRGRTGDKAYYICNPVNQQWKKLPKPEANHGSDPALVLIFEPSLLNFVADFKLVCAIPSPDFDDAYEFEIYSSIENSWKISSEICFGDRGRILRKGGVHVNGVVYWLSNRFSLVAFDLKKERSTVIPCYEIHGAYALGVMNGQLCASHKKGTELTVFVLSNIYANAMHMRAASKTWKRFISVHINNADIKAMVNGYEQNVFATESDAIVFHDGRRIFSYNLSTKETKMLCTDAEFGRSSVYVSYVNSLVSL*

Click here to download the sequence:
Link to NCBI Protein BLAST