Transcript Information: R_Transcript_55046.p1


Annotated TAIR IDAT2G06510.1
Annotated Gene Namereplication protein A 1A
Annotated Gene Symbol(s)ATRPA1A, RPA1A, RPA70A, ATRPA70A
Annotation TypeOrtholog
Chromosome Positionchr2:2585215-2587601 | Forward length=640
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.068350028459
Replicate 26.4192510826899
Replicate 37.0398094841679
Condition 2: 8 Hour
Replicate 18.2269387004279
Replicate 28.687985938295
Replicate 310.087439660056
Condition 3: 24 Hour
Replicate 19.8338378093191
Replicate 28.1829224864721
Replicate 39.933114388162


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55046.p1 GENE.R_Transcript_55046~~R_Transcript_55046.p1 ORF type:complete len:628 (+),score=118.11,Rep_fac-A_C|PF08646.6|6.6e+03,Rep_fac-A_C|PF08646.6|9.7e-51,REPA_OB_2|PF16900.1|1.6e+03,REPA_OB_2|PF16900.1|3.1e-31,Rep-A_N|PF04057.8|1.6e-24,tRNA_anti-codon|PF01336.21|1.6e-09,tRNA_anti-codon|PF01336.21|13,tRNA_anti-codon|PF01336.21|3.5e+02 R_Transcript_55046:248-2131(+)
ATGGCGGTAAATCTGACGAGGAATGCGATAGAGATGATAATCTCAGGTGACGTGAACTCGAAACCCTTGGTTCAGGTTGTGAACATCATTTCCGTTCGTAACCAGGACCGTTACCGTCTCACCTTATCCGACGCCGTTTCGACTCTTCACGCCATGATTGCTACTCAGCTTAACGATCGTGTCAAGTTCGGTCATGTTCGTAAGGGTTCCGTCATTCAATTGCTCGAATATTTTTGCAGTACTGTCCAAAATCGCAAGATTGTTGTTATCCTGAACATGGAAACTATCATACCAGAATGTGAGATAATAGGGAACCCACAGTTCCCAGCTGGAGCTGATTCGTCTGTTGGAAATGGATTGGCTAATGGTTATGCGACTAATGCCGTTAATCCAATGAGAGTCAATAACAACACCAAAGTCAGTGGCTCAAGTATCGGCAATAATGCGCAGAGTTTTAGACCAACTGTTCAACCTGCTTATCAGCCACCTCCTAATTTCAGAAATCATGGTCCAATTGTCAAGAATGAGGCACCAGCACGTATCATTCCGATTGCTGCCTTGAATCCTTATCAAGGTCGCTGGGCTATTAAAGCAAGAGTAACGGCTAAAGGTGATCTTCGCCGCTACAACAATGCTAAGGGAGATGGCAAGGTATTTTCTTTTGATCTCCTTGACTCAGATGGCGGTGAAATACGTGTTACCTGCTTTAATGCTGTGGTTGATCGCTTTTATGATGTTATTGAGGTTGGGAAAGTTTATGTGATATCAAAGGGTAGCCTGAAACCTGCACAAAAGAACTTCAACCATTTGAAAAATGAGTGGGAGATCTTTCTGGAGTCAACTTCTACTGTTGATCTGTGCCCAGATGAGGATGCTTCGATACCCAGACAGCAGTTCAACTTCAGACCTATCAGTGAAATTGAGGGTGCTGAAAATAATTCCATATTGGACATAATTGGTGTTGTAATTTCAGTCAACCCTTCAGTCCCTATCTTGAGGAAGAATGGGATGGAAACACAGAAAAGAACTATAAATCTCAAAGATATGTCTGGTCGGAGCATTGAGCTGACCCTGTGGGGGGATTTCTGCCATAGAGAAGGTCAGAAGCTCCAAGATTTGTTCGATTCAGGAAACTTTCCAGTTGTTGCTGTCAAGGCAGGAAAAGTAAATGACTTCAGTGGGAAATCGGTAGGGACTATTTCTTCTACCCAGCTCTTTATAAACCCTGAAATTCCTGAAGCTCACAATTTGATAGAATGGTTTGTTCGAGGAGGGAAAGACAGTGCTGCTGTATCTATCTCTAGAGATGTTGTCCCTCTTGGGGGAAGGAATGAGATCCGGAAAACTATTTCCCAGATTAAGGATGAGGGTTTGGGGAGATCAGAGAGACCAGATTGGGTTATGGTTAAGGCAACTGTATCTTTCATCAAAACAGATAATTTCTGTTACACTGCTTGCCCATTGATGATTGGAGACAGACAGTGCAATAAGAAAGTTACAAATTCGGGAAGCTCAATATGGGTATGTGACCGTTGCAATCAAGAATTTGAGGAGTGTGATTACCGTTATTTGCTTCAAGCACAAATTCAGGATCACACAGGATTGACTTGGGTAACAGCATTCCAAGAATCCGGGGAGGAGATCATGGGGTGCTCTGCTAAAGAGTTGTACACATTAAAATATGAAGAGCAAGATGAAGACAGGTTTGCTGAAATTTTTCATGGCAGGCTTTTTGTTCCATTCCTTCTCAAGCTCAAGATAAAGGAAGAAGTTTATGGAGAAGAACAAAGAGTAAAGATAACAGTAGTCAAAGCAGACAGGGTGGATTACTCAGCAGAGAGCAGGTATCTGATTGATGCAATGCTGAAGCATCGTCGTCGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55046.p1 GENE.R_Transcript_55046~~R_Transcript_55046.p1 ORF type:complete len:628 (+),score=118.11,Rep_fac-A_C|PF08646.6|6.6e+03,Rep_fac-A_C|PF08646.6|9.7e-51,REPA_OB_2|PF16900.1|1.6e+03,REPA_OB_2|PF16900.1|3.1e-31,Rep-A_N|PF04057.8|1.6e-24,tRNA_anti-codon|PF01336.21|1.6e-09,tRNA_anti-codon|PF01336.21|13,tRNA_anti-codon|PF01336.21|3.5e+02 R_Transcript_55046:248-2131(+)
MAVNLTRNAIEMIISGDVNSKPLVQVVNIISVRNQDRYRLTLSDAVSTLHAMIATQLNDRVKFGHVRKGSVIQLLEYFCSTVQNRKIVVILNMETIIPECEIIGNPQFPAGADSSVGNGLANGYATNAVNPMRVNNNTKVSGSSIGNNAQSFRPTVQPAYQPPPNFRNHGPIVKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYDVIEVGKVYVISKGSLKPAQKNFNHLKNEWEIFLESTSTVDLCPDEDASIPRQQFNFRPISEIEGAENNSILDIIGVVISVNPSVPILRKNGMETQKRTINLKDMSGRSIELTLWGDFCHREGQKLQDLFDSGNFPVVAVKAGKVNDFSGKSVGTISSTQLFINPEIPEAHNLIEWFVRGGKDSAAVSISRDVVPLGGRNEIRKTISQIKDEGLGRSERPDWVMVKATVSFIKTDNFCYTACPLMIGDRQCNKKVTNSGSSIWVCDRCNQEFEECDYRYLLQAQIQDHTGLTWVTAFQESGEEIMGCSAKELYTLKYEEQDEDRFAEIFHGRLFVPFLLKLKIKEEVYGEEQRVKITVVKADRVDYSAESRYLIDAMLKHRRR*

Click here to download the sequence:
Link to NCBI Protein BLAST