Transcript Information: R_Transcript_55092.p1


Annotated TAIR IDAT4G31120.1
Annotated Gene NameSHK1 binding protein 1
Annotated Gene Symbol(s)SKB1, ATPRMT5
Annotation TypeOrtholog
Chromosome Positionchr4:15132185-15136568 | Reverse length=642
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.279769774712
Replicate 29.139942038145
Replicate 310.599160166256
Condition 2: 8 Hour
Replicate 19.9136074215635
Replicate 29.3255428074351
Replicate 312.681262214243
Condition 3: 24 Hour
Replicate 118.974260768102
Replicate 216.818393765874
Replicate 318.256411215251


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55092.p1 GENE.R_Transcript_55092~~R_Transcript_55092.p1 ORF type:complete len:657 (+),score=121.50,PRMT5|PF05185.12|3.7e-174,SAMBD|PF16950.1|5.3e-116 R_Transcript_55092:174-2144(+)
ATGCCTCTAGGTGAGAATGCAGGGGACAAAAGCGAGTCCCGTTACTGCGGAGTAGAAACAGAGTTCAGCGATGACATGCCTCATCTCCTTCATCTCAACATCAATGGCGGCTTCGATTTCGTCCTTGCTCCTTTGGTGGACCCTGCCTATAGGCCTAGTGCACAAACTTCTGGTGATAGGAGTCTTGGTGCTCTCCCTGTTGCCGGTTCAGACTTGGTTTTAAGTCCTGCCCAGTGGAGTAGTCATGTTGTTGGGAAAATCAGCTCGTGGATTGATTTGGATTCTGATGATGAAATACTTCGGAGGGATTCTGAGATCAGCCTGAAGCAAGAAATAGCTTGGGCTTCTCATCTCTCACTGCAGGCATGCCTTCTCCCAACCCCTAGAGGTTCTTCATGTGCCAACTATGCGAGGTGTGTGAATCAGATTCTACAAAGCTCAAACAACATGCAGTTGTGGCTCAGGATTCCCTTAAGGAAGCAGGAGGATGGTGAGCATATGGAAGATCAGTCTCTGGGGGGAGATCCCATTGATTCGTGGGAGACATGGAACTCATTTCGTCTTCTCTGTGAACATAATAGTCAACTTTCAGTTGCTCTGGATGTCCTGAGTACACTCCCTTCTACAAATTCTTTAGGGCGGTGGTTTGGAGAGCCAGTACGAGCAGCAATTGTACACTCTAATTCTTTTCTTACAAATGCTCGTGGATATCCATGCTTATCAAAGCGCCATCAGAAACTAGTCACGACTTTCTTTAACTATTCTGTACAGGTAGTCATTTCTGGAGAAGTGGCACATAATATTCCATTAAGAACATCAGAGTTGGCTGCCAATAATGCTAGTAATCATGTTAATAGTAGTCAGAATCATCCTCTGAGACCATATTTGGACTACATTGGTTATCTATTCCAAAAGATGGATCCGCTCCCTGAACAAGAGCGGTATGAGCTTGGTTATAGGGATTTTCTGCAATCACCTTTGCAACCTCTCATGGATAACCTTGAGGCACAGACATATGAGACATTTGAAAAGGATACAGTAAAATACATCCAGTATCAAAGGGCTGTCAGTAAAGCTTTGATGGATAGAGTTTCTGATGACAATGCTTCAACTGTGACCACTGTGCTGATGGTTGTTGGAGCTGGACGTGGACCTCTAGTCAGAGCTTCTCTGCAGGCTGCTGAGGAAACAGGCAGAAAGTTGAAAGTTTATGCTGTGGAGAAGAATCCTAACGCTGTGATTACTCTTCATAGCTTGGTTAAACTTGAAGGATGGGAGAATGTTGTGACCATAGTATCCAGTGACATGCGTTGCTGGGATGCTCCTGAGAAGGCTGACATATTGGTTAGCGAGTTGTTGGGTTCATTTGGTGACAATGAGCTTTCTCCTGAGTGTCTTGATGGAGCCCAAAGATTTCTGAAGCCAGATGGCATCTCCATACCATCATCCTACACGAGTTTTCTCCAACCAATTACTACAACAAAATTGTATAATGATGTTAAGGCACATAAAGATCTAGTGCACTTTGAAACTGCTTATGTTGTTAAACTGCACAAAGTAGCAAGGCTTGCTCCTTCTAAGCCCGTTTTCACTTTTGACCATCCAAATAATTCACACAACAAAGACAATAAGCGTTATACGAAGCTGACATTTGACTTACCAAGTGATACTGGTTCAGCATTGGTGCATGGATTTGCAGGATACTTTGATGCAACTCTCTACAAAGATGTACATCTTGGTATAGAGCCAACTATGCCAACACCCAATATGTTCAGTTGGTTTCCAATCTATTTCCCACTGAGAACACCAGTGTGTGTAAGGCCAGACTCCCCTCTAGAATTTCATATCTGGCGATGCTGTGGTCCCACTAAGGTTTGGTATGAATGGTGTGTCTTATCTCCTTCCCCATCTCCAATTCACAATAGCAATGGTCGTTCATACTGGGTTTTGTCTGTAGTGTGTCAACTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55092.p1 GENE.R_Transcript_55092~~R_Transcript_55092.p1 ORF type:complete len:657 (+),score=121.50,PRMT5|PF05185.12|3.7e-174,SAMBD|PF16950.1|5.3e-116 R_Transcript_55092:174-2144(+)
MPLGENAGDKSESRYCGVETEFSDDMPHLLHLNINGGFDFVLAPLVDPAYRPSAQTSGDRSLGALPVAGSDLVLSPAQWSSHVVGKISSWIDLDSDDEILRRDSEISLKQEIAWASHLSLQACLLPTPRGSSCANYARCVNQILQSSNNMQLWLRIPLRKQEDGEHMEDQSLGGDPIDSWETWNSFRLLCEHNSQLSVALDVLSTLPSTNSLGRWFGEPVRAAIVHSNSFLTNARGYPCLSKRHQKLVTTFFNYSVQVVISGEVAHNIPLRTSELAANNASNHVNSSQNHPLRPYLDYIGYLFQKMDPLPEQERYELGYRDFLQSPLQPLMDNLEAQTYETFEKDTVKYIQYQRAVSKALMDRVSDDNASTVTTVLMVVGAGRGPLVRASLQAAEETGRKLKVYAVEKNPNAVITLHSLVKLEGWENVVTIVSSDMRCWDAPEKADILVSELLGSFGDNELSPECLDGAQRFLKPDGISIPSSYTSFLQPITTTKLYNDVKAHKDLVHFETAYVVKLHKVARLAPSKPVFTFDHPNNSHNKDNKRYTKLTFDLPSDTGSALVHGFAGYFDATLYKDVHLGIEPTMPTPNMFSWFPIYFPLRTPVCVRPDSPLEFHIWRCCGPTKVWYEWCVLSPSPSPIHNSNGRSYWVLSVVCQL*

Click here to download the sequence:
Link to NCBI Protein BLAST