Transcript Information: R_Transcript_55108.p1


Annotated TAIR IDAT3G22540.1
Annotated Gene NameProtein of unknown function (DUF1677)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:7984233-7984565 | Reverse length=110
E-Value3.8E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.742001084908
Replicate 214.86101782712
Replicate 317.403170771103
Condition 2: 8 Hour
Replicate 116.376909672508
Replicate 212.632446234956
Replicate 314.026244570299
Condition 3: 24 Hour
Replicate 118.93273712934
Replicate 221.625610990112
Replicate 320.040041304237


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55108.p1 GENE.R_Transcript_55108~~R_Transcript_55108.p1 ORF type:5prime_partial len:154 (+),score=13.01,DUF1677|PF07911.9|2.5e-33 R_Transcript_55108:2-463(+)
TCTTCGATCAATTCAAACTCCCCCCCCCCCCCCCCCCCTCATTATTTCAACATCAATCAACCCAACCAAACAAAAACTATGGAAGTGGAGCTGGTAAAGTGCGAGTGTTGTGGCTTGAAAGAGGACTGCACAACCGCGTACATAGCCGCAGTGAAGGCCAAGTTTGACGGCAAATGGCTGTGCGGCTTGTGCTCGGAGGCTGTGAGTGACGAAGTTAGCCGGACAGCGTCAGGAATGCTCCGCCAGTACTTGAGCGTCCAGGATGCTGTCCGAGCCCACATGTCTTTCTGTCGGAAGTATAAGTCAAGCCCGGCATCGAGGGTGGCCGACGGCATGCGACAGATGCTCCGACGAAGGTCCGGTGACTTGTCTTCTTCTTCTTCTTCTTCAGCAGCTAGGAAATATGGGAGATCCGCTAGTGCTTCACAAGTGGGAGATGAATCCTCTTTCTCTCGCTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55108.p1 GENE.R_Transcript_55108~~R_Transcript_55108.p1 ORF type:5prime_partial len:154 (+),score=13.01,DUF1677|PF07911.9|2.5e-33 R_Transcript_55108:2-463(+)
SSINSNSPPPPPPHYFNINQPNQTKTMEVELVKCECCGLKEDCTTAYIAAVKAKFDGKWLCGLCSEAVSDEVSRTASGMLRQYLSVQDAVRAHMSFCRKYKSSPASRVADGMRQMLRRRSGDLSSSSSSSAARKYGRSASASQVGDESSFSRY*

Click here to download the sequence:
Link to NCBI Protein BLAST