Transcript Information: R_Transcript_55154.p1


Annotated TAIR IDAT3G54826.1
Annotated Gene NameZim17-type zinc finger protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20310354-20311652 | Forward length=223
E-Value8.7E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2358775646424
Replicate 21.4216245073535
Replicate 31.1930592497996
Condition 2: 8 Hour
Replicate 12.6781414786049
Replicate 22.5621843776358
Replicate 33.0252684367312
Condition 3: 24 Hour
Replicate 12.1522944275973
Replicate 22.6420362212671
Replicate 32.6219646239512


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55154.p1 GENE.R_Transcript_55154~~R_Transcript_55154.p1 ORF type:5prime_partial len:192 (+),score=33.56,zf-DNL|PF05180.8|5.8e-25 R_Transcript_55154:1-576(+)
AACATGGCAGCAAGGTGGTTACAATCTCATTTACTTCAACACTTAGCCTCAAAACAGCCCCAAATTCCTCATTTTGGAGCTTTAACAGAAGCAGATGGGCGATTCCTTCCCTTATCAAATACAATCTTTGGAACATATGCCAATCTGAGGCGAGGAATTCAGACAGAATCAGAAGCATCGCTTGAAGATAGTAAATCTGCTGATAAGTCTGAGGTTACCACCTCTAACGCTGATGCAGTGCCAGAATCTAGAATTGATACACAAGACGCTGTCAAGTACACTGCTATGTCCAACTTAAAAGTATCCTCACGACATGATCTTGCCATGATCTTTACTTGCAAGGTCTGTGAGACAAGATCAATGAAGACATGTTGCCGTGAATCGTATGAGAATGGCGTAGTTGTGGTTCGTTGTGGTGGATGTAATAATCTTCATTTAATTGCAGATCGACTTGGGTGGTTTGGAGAGCCAGGGAGCATTGAGGAGCTACTTGCTGCCCGTGGGGAGGGTGTGAAGAAGGGTTCTGTCGATTCCTTGAATTTTACTCTTGAGGATTTGGCTGGGAAGAGACTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55154.p1 GENE.R_Transcript_55154~~R_Transcript_55154.p1 ORF type:5prime_partial len:192 (+),score=33.56,zf-DNL|PF05180.8|5.8e-25 R_Transcript_55154:1-576(+)
NMAARWLQSHLLQHLASKQPQIPHFGALTEADGRFLPLSNTIFGTYANLRRGIQTESEASLEDSKSADKSEVTTSNADAVPESRIDTQDAVKYTAMSNLKVSSRHDLAMIFTCKVCETRSMKTCCRESYENGVVVVRCGGCNNLHLIADRLGWFGEPGSIEELLAARGEGVKKGSVDSLNFTLEDLAGKRL*

Click here to download the sequence:
Link to NCBI Protein BLAST