Transcript Information: R_Transcript_55158.p1


Annotated TAIR IDAT3G54826.1
Annotated Gene NameZim17-type zinc finger protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:20310354-20311652 | Forward length=223
E-Value7E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.300435827028
Replicate 23.5177047817882
Replicate 33.2381252099273
Condition 2: 8 Hour
Replicate 12.8203614075361
Replicate 23.6292530737003
Replicate 33.5162805913839
Condition 3: 24 Hour
Replicate 14.2069280260191
Replicate 25.65815542219
Replicate 33.7816453123959


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55158.p1 GENE.R_Transcript_55158~~R_Transcript_55158.p1 ORF type:complete len:191 (+),score=32.34,zf-DNL|PF05180.8|5.7e-25 R_Transcript_55158:143-715(+)
ATGGCAGCAAGGTGGTTACAATCTCATTTACTTCAACACTTAGCCTCAAAACAGCCCCAAATTCCTCATTGTAGAGCTTTAACAGAAACATATGGGCGATTCCTTCCCTTTTCAAATACAATCTTTGGAGCATATGCCAATCTGAGGCGAGGAATTCAGACAGAATCAGAAGCATCGCTTAAAGATAGTAAATCTACTGATAAGGCTGAGTTTACCACCTCTAATGCTGATGCAGTGCCAGACTCTAGAATTGATACCCAAGACTCTGTCAAGTACACTGCTATGTCCAACTTAAAAGTATCCTCACGACATGATCTTGCCATGATCTTTACTTGCAAGGTCTGTGAGACAAGATCAATGAAGACATGTTGCCGTGAATCGTATGAGAATGGCGTAGTTGTGGTTCGTTGTGGTGGATGTAATAATCTTCATTTAATTGCAGATCGACTTGGGTGGTTTGGAGAGCCAGGGAGCATTGAGGAGCTACTTGCTGCCCGTGGGGAGGGTGTGAAGAAGGGTTCTGTCGATTCCTTGAATTTTACTCTTGAGGATTTGGCTGGGAAGAGACTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55158.p1 GENE.R_Transcript_55158~~R_Transcript_55158.p1 ORF type:complete len:191 (+),score=32.34,zf-DNL|PF05180.8|5.7e-25 R_Transcript_55158:143-715(+)
MAARWLQSHLLQHLASKQPQIPHCRALTETYGRFLPFSNTIFGAYANLRRGIQTESEASLKDSKSTDKAEFTTSNADAVPDSRIDTQDSVKYTAMSNLKVSSRHDLAMIFTCKVCETRSMKTCCRESYENGVVVVRCGGCNNLHLIADRLGWFGEPGSIEELLAARGEGVKKGSVDSLNFTLEDLAGKRL*

Click here to download the sequence:
Link to NCBI Protein BLAST