Transcript Information: R_Transcript_55160.p1


Annotated TAIR IDAT3G54826.1
Annotated Gene NameZim17-type zinc finger protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:20310354-20311652 | Forward length=223
E-Value3E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.61753824753818
Replicate 31.1790232586255
Condition 2: 8 Hour
Replicate 10.54012937383629
Replicate 21.315345990658
Replicate 30.93427407604933
Condition 3: 24 Hour
Replicate 10
Replicate 20.48651306376273
Replicate 30.48281701515215


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55160.p1 GENE.R_Transcript_55160~~R_Transcript_55160.p1 ORF type:complete len:136 (+),score=18.22 R_Transcript_55160:143-550(+)
ATGGCAGCAAGGTGGTTACAATCTCATTTACTTCAACACTTAGCCTCAAAACAGCCCCAAATTCCTCATTGTAGAGCTTTAACAGAAACATATGGGCGATTCCTTCCCTTTTCAAATACAATCTTTGGAGCATATGCCAATCTGAGGCGAGGAATTCAGACAGAATCAGAAGCATCGCTTAAAGATAGTAAATCTACTGATAAGGCTGAGTTTACCACCTCTAATGCTGATGCAGTGCCAGACTCTAGAATTGATACCCAAGACTCTGTCAAGTACACTGCTATGTCCAACTTAAAAGTATCCTCACGACATGATCTTGCCATGATCTTTACTTGCAAGATCGACTTGGGTGGTTTGGAGAGCCAGGGAGCATTGAGGAGCTACTTGCTGCCCGTGGGGAGGGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55160.p1 GENE.R_Transcript_55160~~R_Transcript_55160.p1 ORF type:complete len:136 (+),score=18.22 R_Transcript_55160:143-550(+)
MAARWLQSHLLQHLASKQPQIPHCRALTETYGRFLPFSNTIFGAYANLRRGIQTESEASLKDSKSTDKAEFTTSNADAVPDSRIDTQDSVKYTAMSNLKVSSRHDLAMIFTCKIDLGGLESQGALRSYLLPVGRV*

Click here to download the sequence:
Link to NCBI Protein BLAST